RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 TMBIM4Q9HC24 238 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 MRM3Q9HC36 420 aaKnown RBP14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 HPS4Q9NQG7 708 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 BCCIPQ9P287 314 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 SLC24A2Q9UI40 661 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 RABGEF1Q9UJ41 708 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 SOX13Q9UN79 622 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 RAI2Q9Y5P3 530 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 KIF26AQ9ULI4 1882 aaPredicted RBP14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 PDE4DIPQ5VU43 2346 aa14.41□□□□□ -0.1
HMGA1P1-201ENST00000415560 DOCK8Q8NF50 2099 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 A0A1W2PQ67 120 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 POC1B-GALNT4F8VUJ3 575 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 H3BQ06 376 aaPredicted RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 RGS16O15492 202 aaPredicted RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 CDH16O75309 829 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 POP4O95707 220 aaKnown RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 DLDP09622 509 aaKnown RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 PAMP19021 973 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 GJA4P35212 333 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 MSH2P43246 934 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 RGRP47804 291 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 OLIG2Q13516 323 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 DLG2Q15700 870 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 LGSNQ5TDP6 509 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 AGBL2Q5U5Z8 902 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 STEAP4Q687X5 459 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 DENND5AQ6IQ26 1287 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 C22orf39Q6P5X5 142 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 PKN3Q6P5Z2 889 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 ZNF449Q6P9G9 518 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 UNC5AQ6ZN44 842 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 ETFBKMTQ8IXQ9 262 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 KDM1BQ8NB78 822 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 FGF14Q92915 247 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 LRCH3Q96II8 777 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 TUBGCP5Q96RT8 1024 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 SRPK1Q96SB4 655 aaKnown RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 KIFC1Q9BW19 673 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 ATP13A3Q9H7F0 1226 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 UBE2ZQ9H832 354 aaPredicted RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 PIH1D1Q9NWS0 290 aaKnown RBP14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 ELOVL2Q9NXB9 296 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 FAM169AQ9Y6X4 670 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 CHD9Q3L8U1 2897 aa14.4□□□□□ -0.1
HMGA1P1-201ENST00000415560 ANKRD36A6QL64 1941 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TCRBV9S1A1TA0A576 114 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 HMGB1P1B2RPK0 211 aaPredicted RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 ANHXE9PGG2 379 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 K7ERQ8 282 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 MBTPS2O43462 519 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SMAD6O43541 496 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SYF2O95926 243 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 KCNA5P22460 613 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SERPINA4P29622 427 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 CTSOP43234 321 aaPredicted RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SLC6A11P48066 632 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 EPHB1P54762 984 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 RPL26P61254 145 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 NAB1Q13506 487 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 FRG1Q14331 258 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 POU6F1Q14863 301 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 CCDC85BQ15834 202 aaPredicted RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 LONRF1Q17RB8 773 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 GEN1Q17RS7 908 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 MYLK3Q32MK0 819 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SIRPB2Q5JXA9 342 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 ARMC12Q5T9G4 340 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TMEM135Q86UB9 458 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TDRPQ86YL5 185 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 RNF135Q8IUD6 432 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SUGP1Q8IWZ8 645 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 AGGF1Q8N302 714 aaeCLIP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 ZNF669Q96BR6 464 aaPredicted RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 PGM2Q96G03 612 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TDRD1Q9BXT4 1180 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 CPEB1Q9BZB8 566 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TM6SF2Q9BZW4 377 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 PPANQ9NQ55 473 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 CHRAC1Q9NRG0 131 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 FAM53CQ9NYF3 392 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 VPS18Q9P253 973 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 EVLQ9UI08 416 aaPredicted RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 RPL26L1Q9UNX3 145 aaKnown RBP14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 CHKBQ9Y259 395 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TCAF1Q9Y4C2 921 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 PCDHGC4Q9Y5F7 938 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 NUMBLQ9Y6R0 609 aa14.39□□□□□ -0.11
HMGA1P1-201ENST00000415560 TBC1D3BA6NDS4 549 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 SOCS5O75159 536 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 ALDH1A2O94788 518 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 PAPSS2O95340 614 aaPredicted RBP14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 CRTAMO95727 393 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 APODP05090 189 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 FOSL2P15408 326 aa14.38□□□□□ -0.11
HMGA1P1-201ENST00000415560 PRKCHP24723 683 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms