RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 ATP6V0A1Q93050 837 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 TRIM43Q96BQ3 446 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-209ENST00000415046 MBOAT7Q96N66 472 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 RIT2Q99578 217 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 LBHD1Q9BQE6 289 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-209ENST00000415046 ZNF518BQ9C0D4 1074 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 FAM49AQ9H0Q0 323 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-209ENST00000415046 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 SMARCAD1Q9H4L7 1026 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 KCNMB3Q9NPA1 279 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 ERAP1Q9NZ08 941 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 MTMR6Q9Y217 621 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 DRG1Q9Y295 367 aaKnown RBP4.8□□□□□ -1.64
PTPRK-209ENST00000415046 PCDHA10Q9Y5I2 948 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 CDY1Q9Y6F8 540 aa4.8□□□□□ -1.64
PTPRK-209ENST00000415046 IGSF9BQ9UPX0 1349 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 PRRC2BQ5JSZ5 2229 aaKnown RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TBX3O15119 743 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 INSIG1O15503 277 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 AKAP10O43572 662 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TBC1D4O60343 1298 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 MT-CO3P00414 261 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 CD4P01730 458 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 APEHP13798 732 aaKnown RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 ITGB8P26012 769 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 SFNP31947 248 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TECP42680 631 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 RAB27AP51159 221 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 PKP1Q13835 747 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 ZRSR1Q15695 479 aaKnown RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TMEM266Q2M3C6 531 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 RILPL1Q5EBL4 403 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 C10orf25Q5T742 122 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 PLA2G4FQ68DD2 849 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 EPM2AIP1Q7L775 607 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 ANKRD33Q7Z3H0 272 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 DEFB128Q7Z7B8 93 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 SMAP1Q8IYB5 467 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 EXOC8Q8IYI6 725 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 DNAJB14Q8TBM8 379 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 PMM1Q92871 262 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 FAM20AQ96MK3 541 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 CCDC43Q96MW1 224 aaKnown RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 LXNQ9BS40 222 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 VN1R3Q9BXE9 311 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TRIM5Q9C035 493 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 FTOQ9C0B1 505 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TTC12Q9H892 705 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 RGL1Q9NZL6 768 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 DNMT3BQ9UBC3 853 aaKnown RBP4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TUBE1Q9UJT0 475 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 ZNF180Q9UJW8 692 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 TBX21Q9UL17 535 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 PCDHA12Q9UN75 941 aa4.79□□□□□ -1.64
PTPRK-209ENST00000415046 MYH10P35580 1976 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CUL9Q8IWT3 2517 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 A0A087WWV3 80 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 IGKV6D-21A0A0A0MT36 114 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 LY6G6EA0A0G2JKS1 128 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 PP2D1A8MPX8 630 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 ADAM10O14672 748 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 HBP1O60381 514 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 SRGAP2O75044 1071 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 TUSC2O75896 110 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 SCGB1D2O95969 90 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 TIMP1P01033 207 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CSF2RAP15509 400 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 KLRC1P26715 233 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 EPHA3P29320 983 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 PRKAR1BP31321 381 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 ANP32AP39687 249 aaKnown RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 THPOP40225 353 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CCT6AP40227 531 aaKnown RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 QARSP47897 775 aaKnown RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 TRAPPC10P48553 1259 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 DIO1P49895 249 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CLCN3P51790 818 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 TIAL1Q01085 375 aaKnown RBP eCLIP4.78□□□□□ -1.641e-12■■■■■ 43.5
PTPRK-209ENST00000415046 PPP2R5CQ13362 524 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 BFSP2Q13515 415 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 RAPGEF1Q13905 1077 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 LARS2Q15031 903 aaKnown RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 TWIST1Q15672 202 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 XKR9Q5GH70 373 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 ZNF484Q5JVG2 852 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CRELD2Q6UXH1 353 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 LRRC8DQ7L1W4 858 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 OVCH2Q7RTZ1 564 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 PLPPR4Q7Z2D5 763 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 SERINC5Q86VE9 423 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 SESTD1Q86VW0 696 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 TPH2Q8IWU9 490 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 METTL13Q8N6R0 699 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 RDM1Q8NG50 284 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 OR56A3Q8NH54 315 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms