RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 INO80DQ53TQ3 878 aaPredicted RBP15.73■□□□□ 0.11
ACTB-202ENST00000414620 PLEKHA7Q6IQ23 1121 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 ZNF571Q7Z3V5 609 aaPredicted RBP15.73■□□□□ 0.11
ACTB-202ENST00000414620 PDZD3Q86UT5 571 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 ZSCAN30Q86W11 494 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 RBFAQ8N0V3 343 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 UMODL1-AS1Q8N2C9 162 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 DENND6BQ8NEG7 585 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 LMX1AQ8TE12 382 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 ARHGEF26Q96DR7 871 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 IFT43Q96FT9 208 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 CRELD1Q96HD1 420 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 LENG8Q96PV6 779 aaPredicted RBP15.73■□□□□ 0.11
ACTB-202ENST00000414620 KCTD15Q96SI1 283 aaPredicted RBP15.73■□□□□ 0.11
ACTB-202ENST00000414620 BPIFA3Q9BQP9 254 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 SLC39A8Q9C0K1 460 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 TCEAL2Q9H3H9 227 aaPredicted RBP15.73■□□□□ 0.11
ACTB-202ENST00000414620 PDFQ9HBH1 243 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 PARVAQ9NVD7 372 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 NLGN3Q9NZ94 848 aa15.73■□□□□ 0.11
ACTB-202ENST00000414620 RP1P56715 2156 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 CHD6Q8TD26 2715 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 LY6G6EA0A0G2JKS1 128 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 NEMP2A6NFY4 417 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 SMTNL1A8MU46 457 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 SCAMP1O15126 338 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 TLX3O43711 291 aaPredicted RBP15.72■□□□□ 0.11
ACTB-202ENST00000414620 MT-CO3P00414 261 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 CSF2P04141 144 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 CKMT1AP12532 417 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 SKILP12757 684 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 TIMP2P16035 220 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 PFN3P60673 137 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 KLHL40Q2TBA0 621 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 DEFB133Q30KQ1 61 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 ARFGAP1Q8N6T3 406 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 RFFLQ8WZ73 363 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 ZNF653Q96CK0 615 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 NAP1L5Q96NT1 182 aaPredicted RBP15.72■□□□□ 0.11
ACTB-202ENST00000414620 LRRC19Q9H756 370 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 MBNL1Q9NR56 388 aaKnown RBP15.72■□□□□ 0.11
ACTB-202ENST00000414620 MYO1AQ9UBC5 1043 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 CNOT8Q9UFF9 292 aaKnown RBP15.72■□□□□ 0.11
ACTB-202ENST00000414620 MYO6Q9UM54 1294 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 PCDHB1Q9Y5F3 818 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 U3KQA8 63 aa15.72■□□□□ 0.11
ACTB-202ENST00000414620 ASXL3Q9C0F0 2248 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 DDX3XO00571 662 aaKnown RBP eCLIP15.71■□□□□ 0.111e-323■□□□□ 8.9
ACTB-202ENST00000414620 DAPK3O43293 454 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 AQP9O43315 295 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 FTLP02792 175 aaPredicted RBP15.71■□□□□ 0.11
ACTB-202ENST00000414620 PRKCGP05129 697 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 RGRP47804 291 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 ZNF165P49910 485 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 PAPOLAP51003 745 aaKnown RBP15.71■□□□□ 0.11
ACTB-202ENST00000414620 THOP1P52888 689 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 E2F1Q01094 437 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 C1orf61Q13536 156 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 IRF4Q15306 451 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 PPP6R3Q5H9R7 873 aaPredicted RBP15.71■□□□□ 0.11
ACTB-202ENST00000414620 ERMARDQ5T6L9 678 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 PPP1R2P3Q6NXS1 205 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 TP53I13Q8NBR0 393 aaPredicted RBP15.71■□□□□ 0.11
ACTB-202ENST00000414620 IFI44Q8TCB0 444 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 ASB12Q8WXK4 309 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 CENPTQ96BT3 561 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 VCPIP1Q96JH7 1222 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 DUSP23Q9BVJ7 150 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 SCUBE2Q9NQ36 999 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 APOBEC3BQ9UH17 382 aaKnown RBP15.71■□□□□ 0.11
ACTB-202ENST00000414620 PNMA8BQ9ULN7 279 aaPredicted RBP15.71■□□□□ 0.11
ACTB-202ENST00000414620 MFHAS1Q9Y4C4 1052 aa15.71■□□□□ 0.11
ACTB-202ENST00000414620 CACNA1GO43497 2377 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 KIF26BQ2KJY2 2108 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 A0A1B0GTH6 734 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 ARHGAP42A6NI28 874 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 DFFAO00273 331 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 BRINP1O60477 761 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 PRAMEF11O60813 436 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 RNF8O76064 485 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 ERCC2P18074 760 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 MIPP30301 263 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 HTR7P34969 479 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 NDST2P52849 883 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 KLHL30Q0D2K2 578 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 TCEA2Q15560 299 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 CDKN3Q16667 212 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 CFAP58Q5T655 872 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 CRTC1Q6UUV9 634 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 ARHGAP36Q6ZRI8 547 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 RFX8Q6ZV50 586 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 PHACTR4Q8IZ21 702 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 NPWQ8N729 165 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 DCBLD1Q8N8Z6 715 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 C1QTNF7Q9BXJ2 289 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 NRSN2Q9GZP1 204 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 SUV39H2Q9H5I1 410 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 SP110Q9HB58 689 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 DKK3Q9UBP4 350 aa15.7■□□□□ 0.1
ACTB-202ENST00000414620 A0A087WV48 116 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms