RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 VPS13AQ96RL7 3174 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 BCLAF3A2AJT9 711 aaKnown RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 PRR23AA6NEV1 266 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 H7C0C1 242 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 HTRA2O43464 458 aaPredicted RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 HLA-DQB2P05538 268 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 RBP3P10745 1247 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 PTPN3P26045 913 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 PTGER3P43115 390 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 ATP5OP48047 213 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 DHPSP49366 369 aaPredicted RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 CCR5P51681 352 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 EIF3EP60228 445 aaKnown RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 MAXP61244 160 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 POLR2LP62875 67 aaKnown RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 ITKQ08881 620 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 LPAL2Q16609 132 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 WDR45BQ5MNZ6 344 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 CFAP58Q5T655 872 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 LYSMD4Q5XG99 296 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 KIAA0895LQ68EN5 471 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 TTC7BQ86TV6 843 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 ARRDC2Q8TBH0 407 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 MAIP1Q8WWC4 291 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 DNASE2BQ8WZ79 361 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 PBKQ96KB5 322 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 TEKT5Q96M29 485 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 HSPA12BQ96MM6 686 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 C6orf106Q9H6K1 298 aaPredicted RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 TRHDEQ9UKU6 1024 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.64■□□□□ 0.25
LINC00398-201ENST00000414407 FADS3Q9Y5Q0 445 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 SHROOM3Q8TF72 1996 aa16.64■□□□□ 0.25
LINC00398-201ENST00000414407 ABCA7Q8IZY2 2146 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3DA0A087WVF3 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3IA0A087WXS9 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3EA0A087X179 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3KA0A087X1G2 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3FA6NER0 549 aaPredicted RBP16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3LB9A6J9 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 ENC1O14682 589 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 AREL1O15033 823 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TSPAN6O43657 245 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 LRP3O75074 770 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 GJB3O75712 270 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 SERPINF2P08697 491 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3HP0C7X1 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TIMP2P16035 220 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 NUDT1P36639 197 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 WASHC5Q12768 1159 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 SLC14A2Q15849 920 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 UGP2Q16851 508 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 PEAR1Q5VY43 1037 aaPredicted RBP16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3GQ6DHY5 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3CQ6IPX1 549 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 CYP2U1Q7Z449 544 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TRIM69Q86WT6 500 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 TBC1D3Q8IZP1 549 aaPredicted RBP16.63■□□□□ 0.25
LINC00398-201ENST00000414407 SLC35B2Q8TB61 432 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 RUBCNQ92622 972 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 NSMCE3Q96MG7 304 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 SLC25A51Q9H1U9 297 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 SEPT10Q9P0V9 454 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 ZKSCAN5Q9Y2L8 839 aa16.63■□□□□ 0.25
LINC00398-201ENST00000414407 SPAG17Q6Q759 2223 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 TCRBV7S2A1N4TA0A589 114 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 TTC24A2A3L6 582 aaPredicted RBP16.62■□□□□ 0.25
LINC00398-201ENST00000414407 FAM47DPA6NHR8 397 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 MEI4A8MW99 385 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 UPK3BL1B0FP48 263 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 UPK3BL2E5RIL1 263 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 CES2O00748 559 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 LATO43561 262 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 IGHV4-34P06331 123 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 CA4P22748 312 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 RBL1P28749 1068 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 PLA2G5P39877 138 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 DSC2Q02487 901 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 NIPAL4Q0D2K0 466 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 ELP6Q0PNE2 266 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 HS1BP3Q53T59 392 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 DARS2Q6PI48 645 aaKnown RBP16.62■□□□□ 0.25
LINC00398-201ENST00000414407 B4GALNT4Q76KP1 1039 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 ASCL5Q7RTU5 278 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 RABEPKQ7Z6M1 372 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 SYT12Q8IV01 421 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 DEFB119Q8N690 84 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 BIRC7Q96CA5 298 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 FAM122AQ96E09 287 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 IMP4Q96G21 291 aaKnown RBP16.62■□□□□ 0.25
LINC00398-201ENST00000414407 FEM1CQ96JP0 617 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 AGAP3Q96P47 875 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 GLOD4Q9HC38 313 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 NCDNQ9UBB6 729 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 PILRBQ9UKJ0 227 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 TTC7AQ9ULT0 858 aaPredicted RBP16.62■□□□□ 0.25
LINC00398-201ENST00000414407 R3HDM2Q9Y2K5 976 aaKnown RBP16.62■□□□□ 0.25
LINC00398-201ENST00000414407 TTLL3Q9Y4R7 772 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 PCDHGC4Q9Y5F7 938 aa16.62■□□□□ 0.25
LINC00398-201ENST00000414407 THADAQ6YHU6 1953 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms