RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 DHX58Q96C10 678 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 RTP4Q96DX8 246 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 HAPLN3Q96S86 360 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 TRIM55Q9BYV6 548 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 DNAI2Q9GZS0 605 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 VANGL2Q9ULK5 521 aa11.05□□□□□ -0.64
CRIM1-202ENST00000413985 OAS3Q9Y6K5 1087 aaKnown RBP11.05□□□□□ -0.64
CRIM1-202ENST00000413985 A0A0D9SEW6 157 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 KCNU1A8MYU2 1149 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 TSPAN6O43657 245 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 RFPL1O75677 317 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 MAP4P27816 1152 aaKnown RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 CD1CP29017 333 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 BLKP51451 505 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 COPB1P53618 953 aaKnown RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 DPYDQ12882 1025 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 EDRF1Q3B7T1 1238 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 RABGAP1LQ5R372 815 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 DCAF12Q5T6F0 453 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 SPECC1LQ69YQ0 1117 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 KDELC2Q7Z4H8 507 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 TAF8Q7Z7C8 310 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 MCEMP1Q8IX19 187 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 BMPERQ8N8U9 685 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 KIAA0895Q8NCT3 520 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 AGBL5Q8NDL9 886 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 FUBP1Q96AE4 644 aaKnown RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 C5orf34Q96MH7 638 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 RBM15Q96T37 977 aaKnown RBP eCLIP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 C7orf25Q9BPX7 421 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 KCTD10Q9H3F6 313 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 ZDHHC6Q9H6R6 413 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 APMAPQ9HDC9 416 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 MRPL40Q9NQ50 206 aaKnown RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 MAP10Q9P2G4 905 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 RCOR3Q9P2K3 495 aaPredicted RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 COQ6Q9Y2Z9 468 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 OR1A2Q9Y585 309 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 RP1L1Q8IWN7 2480 aaPredicted RBP11.04□□□□□ -0.64
CRIM1-202ENST00000413985 APCP25054 2843 aa11.04□□□□□ -0.64
CRIM1-202ENST00000413985 SYNJ2BP-COX16A0A087WUM0 186 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 C16orf96A6NNT2 1141 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 NUDT21O43809 227 aaKnown RBP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 TRUB2O95900 331 aaKnown RBP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 THRAP10827 490 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 DNA2P51530 1060 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 CCNHP51946 323 aaPredicted RBP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 LIMK2P53671 638 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 KRT83P78385 493 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 MC1RQ01726 317 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 ABHD18Q0P651 414 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 AUHQ13825 339 aaKnown RBP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 NR6A1Q15406 480 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 KLHL40Q2TBA0 621 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 ALFQ53S48 1182 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 TTC39BQ5VTQ0 682 aaPredicted RBP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 CNNM4Q6P4Q7 775 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 SLC34A3Q8N130 599 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 ATP6V0D2Q8N8Y2 350 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 Q8NA96 180 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 CCDC150Q8NCX0 1101 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 GOLGA5Q8TBA6 731 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 OR1E3Q8WZA6 343 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 VOPP1Q96AW1 172 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 C19orf60Q96EN9 201 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 HEPHQ9BQS7 1158 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 DPEP2Q9H4A9 486 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 COX16Q9P0S2 106 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 KLQ9UEF7 1012 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 SLC5A6Q9Y289 635 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
CRIM1-202ENST00000413985 PCNX1Q96RV3 2341 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 ANKRD36A6QL64 1941 aa11.03□□□□□ -0.64
CRIM1-202ENST00000413985 ARHGEF17Q96PE2 2063 aaPredicted RBP11.02□□□□□ -0.64
CRIM1-202ENST00000413985 M0QYV0 167 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 KRT86O43790 486 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 STK17BO94768 372 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 RHOCP08134 193 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 CSTF2P33240 577 aaKnown RBP eCLIP11.02□□□□□ -0.65
CRIM1-202ENST00000413985 STAT5AP42229 794 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 PMS2P54278 862 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 STK4Q13043 487 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 EIF4EBP2Q13542 120 aaPredicted RBP11.02□□□□□ -0.65
CRIM1-202ENST00000413985 CUL4BQ13620 913 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 NFATC4Q14934 902 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 CRTC2Q53ET0 693 aaPredicted RBP11.02□□□□□ -0.65
CRIM1-202ENST00000413985 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 FAM186BQ8IYM0 893 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 CCDC112Q8NEF3 446 aa11.02□□□□□ -0.65
CRIM1-202ENST00000413985 OR7D4Q8NG98 312 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms