RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZNF229Q9UJW7 825 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 OTCP00480 354 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 ME2P23368 584 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 PBX1P40424 430 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 MAXP61244 160 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 OLFML2BQ68BL8 750 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 TMEM154Q6P9G4 183 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 C11orf74Q86VG3 221 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 EID3Q8N140 333 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 SLC4A11Q8NBS3 891 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 FIG4Q92562 907 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 PHPT1Q9NRX4 125 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
PHRF1-202ENST00000413872 BUD23O43709 281 aaKnown RBP17.4■□□□□ 0.38
PHRF1-202ENST00000413872 HS6ST1O60243 411 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 CNOT3O75175 753 aaKnown RBP17.4■□□□□ 0.38
PHRF1-202ENST00000413872 MAPKAPK2P49137 400 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 CCDC81Q6ZN84 652 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 A0A1B0GVM2 712 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 TCAF2A6NFQ2 919 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 ALOX15BO15296 676 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 ACSL4O60488 711 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 ULK1O75385 1050 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 SLC25A14O95258 325 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-202ENST00000413872 PRNPP04156 253 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 ANXA6P08133 673 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 NAGLUP54802 743 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 ZNHIT3Q15649 155 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-202ENST00000413872 VARS2Q5ST30 1063 aaKnown RBP17.4■□□□□ 0.38
PHRF1-202ENST00000413872 TMEM26Q6ZUK4 368 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 PLD4Q96BZ4 506 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 MAGEA13PA6NCF6 341 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 SLC28A1O00337 649 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 TPSB2P20231 275 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 L1CAMP32004 1257 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 CDH4P55283 916 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 CRADDP78560 199 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 TPSAB1Q15661 275 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 IRF2BP1Q8IU81 584 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 PROX1Q92786 737 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 EXOC2Q96KP1 924 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 PCDHB18PQ96TA0 734 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 BTBD10Q9BSF8 475 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 CCR3P51677 355 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 PWP1Q13610 501 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 WASHC2DQ5SRD0 308 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 ZNF621Q6ZSS3 439 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 MAGEH1Q9H213 219 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 BPIFA1Q9NP55 256 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 XPNPEP1Q9NQW7 623 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 PCDHB1Q9Y5F3 818 aa17.4■□□□□ 0.38
PHRF1-202ENST00000413872 H3BQF6 201 aa17.39■□□□□ 0.38
PHRF1-202ENST00000413872 ITGA2BP08514 1039 aa17.39■□□□□ 0.38
PHRF1-202ENST00000413872 OR4Q2P0C623 313 aa17.39■□□□□ 0.38
PHRF1-202ENST00000413872 C1DQ13901 141 aaKnown RBP17.39■□□□□ 0.38
PHRF1-202ENST00000413872 DBF4BQ8NFT6 615 aa17.39■□□□□ 0.38
PHRF1-202ENST00000413872 USE1Q9NZ43 259 aa17.39■□□□□ 0.38
PHRF1-202ENST00000413872 ASB3Q9Y575 518 aa17.39■□□□□ 0.38
PHRF1-202ENST00000413872 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 LDLRP01130 860 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 NUDT17P0C025 328 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 JAK1P23458 1154 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 PTP4A2Q12974 167 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 MON1BQ7L1V2 547 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 DET1Q7L5Y6 550 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 APLFQ8IW19 511 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-202ENST00000413872 C7orf61Q8IZ16 206 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 HDAC10Q969S8 669 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 KLHL4Q9C0H6 718 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 PRKAG3Q9UGI9 489 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 CCDC189A1A4V9 331 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 CCNDBP1O95273 360 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 SPATA31D3P0C874 917 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 CCNCP24863 283 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 MC4RP32245 332 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 SLC20A2Q08357 652 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 ARHGAP17Q68EM7 881 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 SPATA31D4Q6ZUB0 917 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 GET4Q7L5D6 327 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-202ENST00000413872 MRPS17Q9Y2R5 130 aaKnown RBP17.39■□□□□ 0.37
PHRF1-202ENST00000413872 MEI4A8MW99 385 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 E9PAM4 449 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 BIRC5O15392 142 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 RGS1Q08116 209 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 SNX32Q86XE0 403 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 POP5Q969H6 163 aaKnown RBP17.39■□□□□ 0.37
PHRF1-202ENST00000413872 RERGQ96A58 199 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-202ENST00000413872 CNBD2Q96M20 576 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 SLC9A7Q96T83 725 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 MIR1-1HGQ9H1L0 117 aa17.39■□□□□ 0.37
PHRF1-202ENST00000413872 MSI1O43347 362 aaKnown RBP17.38■□□□□ 0.37
PHRF1-202ENST00000413872 NDST3O95803 873 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 TPGS2Q68CL5 300 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 CERS6Q6ZMG9 384 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 CAMKK1Q8N5S9 505 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 FGFBP2Q9BYJ0 223 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 AGO3Q9H9G7 860 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms