RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 SLC20A2Q08357 652 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 SLC10A7Q0GE19 358 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 CCINQ13939 588 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ZNF234Q14588 700 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 LBRQ14739 615 aaKnown RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 UBXN2BQ14CS0 331 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 RASA2Q15283 850 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 LONRF1Q17RB8 773 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 FNDC3BQ53EP0 1204 aaKnown RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 TEX44Q53QW1 395 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 C3orf62Q6ZUJ4 267 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 FATE1Q969F0 183 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 MYO19Q96H55 970 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 PPP1R2P1Q96PQ5 205 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 FOXQ1Q9C009 403 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 CNOT10Q9H9A5 744 aaKnown RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 TBC1D17Q9HA65 648 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 LTB4R2Q9NPC1 389 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 THAP10Q9P2Z0 257 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 LGALS13Q9UHV8 139 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 SLC24A2Q9UI40 661 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 FCF1Q9Y324 198 aaKnown RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 MTF2Q9Y483 593 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 EXOC1LA0A1B0GW35 172 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 TMCC1O94876 653 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 NNMTP40261 264 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 SIGLEC14Q08ET2 396 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ZBTB17Q13105 803 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 HNRNPDQ14103 355 aaKnown RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 RFTN1Q14699 578 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 CYTH1Q15438 398 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 KLHL38Q2WGJ6 581 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ACCSLQ4AC99 568 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 INO80DQ53TQ3 878 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 C2orf27AQ580R0 203 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 FAXCQ5TGI0 409 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 MARC1Q5VT66 337 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 CAND1Q86VP6 1230 aaKnown RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ANKMY2Q8IV38 441 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ZNF687Q8N1G0 1237 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ZNF513Q8N8E2 541 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-202ENST00000413636 EDAQ92838 391 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 ACOX2Q99424 681 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 CEP41Q9BYV8 373 aa18.82■□□□□ 0.6
CIRBP-202ENST00000413636 SMIM23A6NLE4 172 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 TTC34A8MYJ7 566 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 STK25O00506 426 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 PSMD3O43242 534 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 JCHAINP01591 159 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 CHRM1P11229 460 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-202ENST00000413636 HNRNPLP14866 589 aaKnown RBP eCLIP18.81■□□□□ 0.6
CIRBP-202ENST00000413636 ELK3P41970 407 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 MAGEA3P43357 314 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 MMP13P45452 471 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 SLCO1A2P46721 670 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 RENBPP51606 427 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 IFI35P80217 286 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-202ENST00000413636 FBXO43Q4G163 708 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 LRRC8BQ6P9F7 803 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 ZNF419Q96HQ0 510 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-202ENST00000413636 CINPQ9BW66 212 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-202ENST00000413636 CAPS2Q9BXY5 557 aa18.81■□□□□ 0.6
CIRBP-202ENST00000413636 RBM22Q9NW64 420 aaKnown RBP eCLIP18.81■□□□□ 0.68e-6■□□□□ 10.3
CIRBP-202ENST00000413636 FAM170BA6NMN3 283 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 AP3B1O00203 1094 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 ATP9BO43861 1147 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 NEBLO76041 1014 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 CHRNB1P11230 501 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 VASPP50552 380 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-202ENST00000413636 GPX6P59796 221 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 PRPSAP1Q14558 356 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 ZNF235Q14590 738 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 DLG2Q15700 870 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 DGKKQ5KSL6 1271 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 HP1BP3Q5SSJ5 553 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-202ENST00000413636 SERPINA13PQ6UXR4 307 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 CCNJLQ8IV13 435 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 CHPFQ8IZ52 775 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 TEX26Q8N6G2 289 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 ZNF366Q8N895 744 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 TEKT5Q96M29 485 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 NELL2Q99435 816 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 IL12RB2Q99665 862 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 CACNA2D2Q9NY47 1150 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 SEPT3Q9UH03 358 aa18.8■□□□□ 0.6
CIRBP-202ENST00000413636 NCOR1O75376 2440 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 WASH3PC4AMC7 463 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 HLA-EP13747 358 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 PSMB4P28070 264 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 HPDP32754 393 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-202ENST00000413636 IL12RB1P42701 662 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 WASP42768 502 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 RHOAP61586 193 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 SKIDA1Q1XH10 827 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 C22orf39Q6P5X5 142 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 METTL3Q86U44 580 aaKnown RBP18.79■□□□□ 0.6
CIRBP-202ENST00000413636 BBS5Q8N3I7 341 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 KDM1BQ8NB78 822 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 KCNV2Q8TDN2 545 aa18.79■□□□□ 0.6
CIRBP-202ENST00000413636 FRS2Q8WU20 508 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms