RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZBED5Q49AG3 693 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 INTS11Q5TA45 600 aaKnown RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 ERMP1Q7Z2K6 904 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 GPR141Q7Z602 305 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 MFSD6LQ8IWD5 586 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 OR2T34Q8NGX1 318 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 OR2T3Q8NH03 318 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 ZUFSPQ96AP4 578 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 PGAP3Q96FM1 320 aaPredicted RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 PLEKHG4BQ96PX9 1271 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 OSBPL2Q9H1P3 480 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 NOL11Q9H8H0 719 aaKnown RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 AAR2Q9Y312 384 aaKnown RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF638Q14966 1978 aaKnown RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 TRIM64A6NGJ6 449 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 NFKBIEO00221 500 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 SPTLC1O15269 473 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 NRP2O60462 931 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 USP2O75604 605 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 JCHAINP01591 159 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 WARSP23381 471 aaKnown RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ACADVLP49748 655 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 PGGT1BP53609 377 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 POU4F1Q01851 419 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 PRKCQQ04759 706 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 RALGDSQ12967 914 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ARL13BQ3SXY8 428 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 PTAR1Q7Z6K3 402 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ERO1BQ86YB8 467 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 GOLM1Q8NBJ4 401 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 RNF169Q8NCN4 708 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 HEXDCQ8WVB3 486 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ABTB1Q969K4 478 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ROPN1LQ96C74 230 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 OMDQ99983 421 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 RHOBTB2Q9BYZ6 727 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 FAIMQ9NVQ4 179 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 CDH7Q9ULB5 785 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 FNDC1Q4ZHG4 1894 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 GPC4O75487 556 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ARCN1P48444 511 aaKnown RBP17.78■□□□□ 0.44
SDCBP-202ENST00000413219 NDUFV1P49821 464 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 TAF6P49848 677 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 RAB15P59190 212 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 MPP1Q00013 466 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 PFKPQ01813 784 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 VGLL4Q14135 290 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF460Q14592 562 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 Q6ZNX1 250 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 GADL1Q6ZQY3 521 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 DENND6AQ8IWF6 608 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 FAM47BQ8NA70 645 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 GRIN3AQ8TCU5 1115 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 TSPAN18Q96SJ8 248 aa17.78■□□□□ 0.44
SDCBP-202ENST00000413219 PLOD2O00469 737 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 XPOTO43592 962 aaKnown RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 HUS1O60921 280 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 FYNP06241 537 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 MYF6P23409 242 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 CD151P48509 253 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 NME5P56597 212 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 TAS2R39P59534 338 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 SFSWAPQ12872 951 aaKnown RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 SV2CQ496J9 727 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 TECRLQ5HYJ1 363 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF618Q5T7W0 954 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 HFE2Q6ZVN8 426 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 GPR180Q86V85 440 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 CAMK1DQ8IU85 385 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 C2CD4AQ8NCU7 369 aaPredicted RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 PPHLN1Q8NEY8 458 aaKnown RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 PPWD1Q96BP3 646 aaKnown RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 ELMO2Q96JJ3 720 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 TBL1YQ9BQ87 522 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 EIF2AQ9BY44 585 aaKnown RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 TRIM15Q9C019 465 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 ANLNQ9NQW6 1124 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 C8orf4Q9NR00 106 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 CCM2LQ9NUG4 571 aaPredicted RBP17.77■□□□□ 0.44
SDCBP-202ENST00000413219 UBP1Q9NZI7 540 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 CCDC167Q9P0B6 97 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 GJD2Q9UKL4 321 aa17.77■□□□□ 0.44
SDCBP-202ENST00000413219 ASB14A6NK59 587 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 AQP12BA6NM10 295 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 BBIP1A8MTZ0 92 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 I6L893 689 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 RECQL4O94761 1208 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 HNRNPLP14866 589 aaKnown RBP eCLIP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 TTKP33981 857 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 SLC12A2P55011 1212 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 CTBP1Q13363 440 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 FAM83EQ2M2I3 478 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 DUS1LQ6P1R4 473 aaKnown RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 CYP2R1Q6VVX0 501 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 FAM43BQ6ZT52 329 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 AQP12AQ8IXF9 295 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 LZTR1Q8N653 840 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 ISOC1Q96CN7 298 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms