RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 TIMP2P16035 220 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 HNRNPA2B1P22626 353 aaKnown RBP19.05■□□□□ 0.64
TRIM56-202ENST00000412507 AKT2P31751 481 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 CSNK1DP48730 415 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 CCT8P50990 548 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 FGL2Q14314 439 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 GRM3Q14832 879 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 TMCO4Q5TGY1 634 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 NCBP2-AS2Q69YL0 99 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 IQCHQ86VS3 1027 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 SPATS2Q86XZ4 545 aaKnown RBP19.05■□□□□ 0.64
TRIM56-202ENST00000412507 CAMK1DQ8IU85 385 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 MAP7D3Q8IWC1 876 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 TMEM145Q8NBT3 493 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 ZNF599Q96NL3 588 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 ELF4Q99607 663 aaPredicted RBP19.05■□□□□ 0.64
TRIM56-202ENST00000412507 ZNF670Q9BS34 389 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 GDF3Q9NR23 364 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 SEPT3Q9UH03 358 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 PCDHGB2Q9Y5G2 931 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 A0A1B0GTQ1 180 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 IGLON5A6NGN9 336 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 AREL1O15033 823 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 DFNA5O60443 496 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 LCA5LO95447 670 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 PEX11BO96011 259 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 KDELR1P24390 212 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 SCNN1BP51168 640 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 RENBPP51606 427 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 CLDN2P57739 230 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 NSUN2Q08J23 767 aaKnown RBP eCLIP19.04■□□□□ 0.64
TRIM56-202ENST00000412507 ZNF235Q14590 738 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 SUZ12Q15022 739 aaKnown RBP19.04■□□□□ 0.64
TRIM56-202ENST00000412507 PAFAH1B3Q15102 231 aaKnown RBP19.04■□□□□ 0.64
TRIM56-202ENST00000412507 TCEAL1Q15170 157 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 DBX2Q6ZNG2 339 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 CCDC170Q8IYT3 715 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 RAPGEF5Q92565 580 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 KLHDC7BQ96G42 594 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 PSKH2Q96QS6 385 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 PANX2Q96RD6 677 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 TUBGCP5Q96RT8 1024 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 TFR2Q9UP52 801 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 BTBD3Q9Y2F9 522 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 HYOU1Q9Y4L1 999 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 PCDHB9Q9Y5E1 797 aa19.04■□□□□ 0.64
TRIM56-202ENST00000412507 COL5A1P20908 1838 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-202ENST00000412507 TTC24A2A3L6 582 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-202ENST00000412507 MAGEC1O60732 1142 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 MAP3K6O95382 1288 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 THEGLP0DJG4 465 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 XPAP23025 273 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-202ENST00000412507 CYLC1P35663 651 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-202ENST00000412507 SIM1P81133 766 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-202ENST00000412507 OVGP1Q12889 678 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 SGCGQ13326 291 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 SHBQ15464 509 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 GCNT7Q6ZNI0 430 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 ZSWIM9Q86XI8 627 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 PGBD5Q8N414 524 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 PQLC3Q8N755 202 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 HCAR2Q8TDS4 363 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 FAF2Q96CS3 445 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 NSMCE3Q96MG7 304 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 ZNF641Q96N77 438 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-202ENST00000412507 C1QTNF2Q9BXJ5 285 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 ATP13A3Q9H7F0 1226 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 PCOLCE2Q9UKZ9 415 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 PCDHA13Q9Y5I0 950 aa19.03■□□□□ 0.64
TRIM56-202ENST00000412507 GOLGA4Q13439 2230 aaKnown RBP19.02■□□□□ 0.64
TRIM56-202ENST00000412507 TSPAN11A1L157 253 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 LRRD1A4D1F6 860 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 SOWAHDA6NJG2 315 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 RAD51BO15315 384 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 FLRT2O43155 660 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 PCDHGA12O60330 932 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 MMP20O60882 483 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 CBFA2T3O75081 653 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 TNNT1P13805 278 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 SERPINA4P29622 427 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 NOP2P46087 812 aaKnown RBP19.02■□□□□ 0.64
TRIM56-202ENST00000412507 BCL2L1Q07817 233 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 HNRNPDQ14103 355 aaKnown RBP19.02■□□□□ 0.64
TRIM56-202ENST00000412507 SPA17Q15506 151 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 TRIP6Q15654 476 aaKnown RBP19.02■□□□□ 0.64
TRIM56-202ENST00000412507 UGP2Q16851 508 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 CFAP58Q5T655 872 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 ZSCAN30Q86W11 494 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 GATAD2AQ86YP4 633 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 OR13H1Q8NG92 308 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 RHBDD1Q8TEB9 315 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 NSMCE1Q8WV22 266 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 HS3ST3A1Q9Y663 406 aa19.02■□□□□ 0.64
TRIM56-202ENST00000412507 PRKCGP05129 697 aa19.01■□□□□ 0.63
TRIM56-202ENST00000412507 COMTP21964 271 aa19.01■□□□□ 0.63
TRIM56-202ENST00000412507 FECHP22830 423 aa19.01■□□□□ 0.63
TRIM56-202ENST00000412507 PMLP29590 882 aa19.01■□□□□ 0.63
TRIM56-202ENST00000412507 GARSP41250 739 aaKnown RBP19.01■□□□□ 0.63
TRIM56-202ENST00000412507 SLC1A1P43005 524 aa19.01■□□□□ 0.63
TRIM56-202ENST00000412507 MMP13P45452 471 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms