RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SUV39H2Q9H5I1 410 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 ATP13A3Q9H7F0 1226 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 NOD2Q9HC29 1040 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 NCDNQ9UBB6 729 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 DKK3Q9UBP4 350 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 GMEB2Q9UKD1 530 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 R3HDM2Q9Y2K5 976 aaKnown RBP14.1□□□□□ -0.15
CPNE1-206ENST00000412056 ATP8A1Q9Y2Q0 1164 aa14.1□□□□□ -0.15
CPNE1-206ENST00000412056 TSPAN11A1L157 253 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 BCLAF3A2AJT9 711 aaKnown RBP14.09□□□□□ -0.15
CPNE1-206ENST00000412056 LRRC72A6NJI9 287 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 HACD1B0YJ81 288 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 SPINT1O43278 529 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 FSBPO95073 299 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ITPKAP23677 461 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 PTPN3P26045 913 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 MAOBP27338 520 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 SERPINA4P29622 427 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 PLA2G5P39877 138 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 MAPK8P45983 427 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 EIF3EP60228 445 aaKnown RBP14.09□□□□□ -0.15
CPNE1-206ENST00000412056 CREB5Q02930 508 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 BCL2L1Q07817 233 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 NIPAL4Q0D2K0 466 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 TRAF2Q12933 501 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 XRCC4Q13426 336 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 IHHQ14623 411 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 CCDC6Q16204 474 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 SLC45A4Q5BKX6 768 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ADAT2Q7Z6V5 191 aaKnown RBP14.09□□□□□ -0.15
CPNE1-206ENST00000412056 SLC13A5Q86YT5 568 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-206ENST00000412056 CADM4Q8NFZ8 388 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ARRDC2Q8TBH0 407 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 FOXJ1Q92949 421 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 FAM122AQ96E09 287 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ZNF641Q96N77 438 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-206ENST00000412056 PCED1AQ9H1Q7 454 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ARRDC1-AS1Q9H2J1 176 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 AMACRQ9UHK6 382 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ITM2BQ9Y287 266 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-206ENST00000412056 TMEM131Q92545 1883 aa14.09□□□□□ -0.15
CPNE1-206ENST00000412056 TBC1D3DA0A087WVF3 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3IA0A087WXS9 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3EA0A087X179 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3KA0A087X1G2 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 GOLGA6L9A6NEM1 432 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3FA6NER0 549 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 UPK3BL1B0FP48 263 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 C10orf142B7Z368 130 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3LB9A6J9 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 UPK3BL2E5RIL1 263 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TRAFD1O14545 582 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 KIF5CO60282 957 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 ATP1A1P05023 1023 aaKnown RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 PRKCGP05129 697 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 IGHV4-34P06331 123 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 RETP07949 1114 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3HP0C7X1 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 RBP3P10745 1247 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TIMP2P16035 220 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 ITIH2P19823 946 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 RBL1P28749 1068 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 CXCR5P32302 372 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 MPLP40238 635 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 CCDC15Q0P6D6 951 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 WASHC5Q12768 1159 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TEX44Q53QW1 395 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 RALGPS1Q5JS13 557 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 CFAP58Q5T655 872 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3GQ6DHY5 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3CQ6IPX1 549 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 CDKL3Q8IVW4 592 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TBC1D3Q8IZP1 549 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 C17orf53Q8N3J3 647 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 DCLK2Q8N568 766 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 TTC13Q8NBP0 860 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 HTR3CQ8WXA8 447 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 PIGKQ92643 395 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 BIRC7Q96CA5 298 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 ECHDC3Q96DC8 303 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 AGAP3Q96P47 875 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 KDM4CQ9H3R0 1056 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 PREBQ9HCU5 417 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 EIF2B4Q9UI10 523 aaKnown RBP14.08□□□□□ -0.16
CPNE1-206ENST00000412056 JRKLQ9Y4A0 524 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 PCDHGC4Q9Y5F7 938 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 FADS3Q9Y5Q0 445 aa14.08□□□□□ -0.16
CPNE1-206ENST00000412056 PCDH15Q96QU1 1955 aa14.07□□□□□ -0.16
CPNE1-206ENST00000412056 MTSS1O43312 755 aa14.07□□□□□ -0.16
CPNE1-206ENST00000412056 HTRA2O43464 458 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-206ENST00000412056 GFRA3O60609 400 aa14.07□□□□□ -0.16
CPNE1-206ENST00000412056 RNGTTO60942 597 aaKnown RBP14.07□□□□□ -0.16
CPNE1-206ENST00000412056 SOCS5O75159 536 aa14.07□□□□□ -0.16
CPNE1-206ENST00000412056 MMP2P08253 660 aa14.07□□□□□ -0.16
CPNE1-206ENST00000412056 MAT2AP31153 395 aaKnown RBP14.07□□□□□ -0.16
CPNE1-206ENST00000412056 BRAT1Q6PJG6 821 aa14.07□□□□□ -0.16
CPNE1-206ENST00000412056 TTC7BQ86TV6 843 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms