RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PTP4A2Q12974 167 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ITGA9Q13797 1035 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 SIM2Q14190 667 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 HES1Q14469 280 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 RNASE12Q5GAN4 147 aaKnown RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 XKR3Q5GH77 459 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TREML2Q5T2D2 321 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRAMEF9Q5VWM5 478 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM46CQ5VWP2 391 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF280DQ6N043 979 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM53AQ6NSI3 398 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PARM1Q6UWI2 310 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CEACAM20Q6UY09 585 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 GPRIN3Q6ZVF9 776 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ABHD12BQ7Z5M8 362 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 NECAB2Q7Z6G3 386 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM178BQ8IXR5 827 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MAML2Q8IZL2 1156 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 DSELQ8IZU8 1212 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 EID3Q8N140 333 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MAPKAPK5-AS1Q8N8E1 139 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 OR14A16Q8NHC5 309 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF671Q8TAW3 534 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PARD3BQ8TEW8 1205 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZFP90Q8TF47 636 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM190Q8WZ59 177 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ESR2Q92731 530 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 GJA10Q969M2 543 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ELSPBP1Q96BH3 223 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CENPTQ96BT3 561 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PLEKHF1Q96S99 279 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 APBA2Q99767 749 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 OSBPL11Q9BXB4 747 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 RBCK1Q9BYM8 510 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 DEFB126Q9BYW3 111 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PUS3Q9BZE2 481 aaKnown RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLC25A39Q9BZJ4 359 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ULBP2Q9BZM5 246 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 SLC39A8Q9C0K1 460 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CYSTM1Q9H1C7 97 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MTG2Q9H4K7 406 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TASP1Q9H6P5 420 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PHAXQ9H814 394 aaKnown RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PROK2Q9HC23 129 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF224Q9NZL3 707 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CACNG5Q9UF02 275 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZDHHC8Q9ULC8 765 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PTCH2Q9Y6C5 1203 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CAPN7Q9Y6W3 813 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 RNF123Q5XPI4 1314 aa-1.47□□□□□ -2.65
RNU4-88P-201ENST00000411220 UNC13CQ8NB66 2214 aa-1.47□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPATA31D1Q6ZQQ2 1576 aa-1.47□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLX4Q8IY92 1834 aa-1.47□□□□□ -2.65
RNU4-88P-201ENST00000411220 PLXNA4Q9HCM2 1894 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 KIAA1217Q5T5P2 1943 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 A0A0A6YYC8 382 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CCDC195A0A1B0GUA6 201 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 C5orf49A4QMS7 147 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 GSG1L2A8MUP6 293 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ANKRD63C9JTQ0 380 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 I3L1I5 382 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 LGALS9O00182 355 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 DLGAP1O14490 977 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBX3O15119 743 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 MAGEC1O60732 1142 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 OPHN1O60890 802 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CLDN14O95500 239 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 MT-CO3P00414 261 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGKV1-5P01602 117 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CD3DP04234 171 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CHRNB1P11230 501 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF182P17025 639 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ATF7P17544 494 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ATP5JP18859 108 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 PAICSP22234 425 aaKnown RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 EIF4BP23588 611 aaKnown RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 FPR3P25089 353 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 PIK3R1P27986 724 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CSTF2P33240 577 aaKnown RBP eCLIP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 BTCP35070 178 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 THPOP40225 353 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CCR5P51681 352 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 WNT4P56705 351 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 GABREP78334 506 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 MT1XP80297 61 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMPRSS15P98073 1019 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TNK1Q13470 666 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 RASA3Q14644 834 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 IL17AQ16552 155 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 SMTNL2Q2TAL5 461 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 MYLK3Q32MK0 819 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 AMZ1Q400G9 498 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 NHSL2Q5HYW2 709 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ALG1LQ6GMV1 187 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF529Q6P280 563 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMEM65Q6PI78 240 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ARSKQ6UWY0 536 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 PLXDC2Q6UX71 529 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 KIAA0408Q6ZU52 694 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TOGARAM2Q6ZUX3 1019 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms