RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 LRRC73Q5JTD7 316 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 PEAR1Q5VY43 1037 aaPredicted RBP24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 TCEAL6Q6IPX3 200 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 BBS12Q6ZW61 710 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 P3H4Q92791 437 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 TCEAL3Q969E4 200 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 TUBGCP5Q96RT8 1024 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 ATP13A3Q9H7F0 1226 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 SCUBE2Q9NQ36 999 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 VPS45Q9NRW7 570 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 RBM22Q9NW64 420 aaKnown RBP eCLIP24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 SLCO1B1Q9Y6L6 691 aa24.12■■□□□ 1.45
UBE2E3-202ENST00000410062 ZNF806P0C7X5 589 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 ABL2P42684 1182 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 AP1S1P61966 158 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 ITKQ08881 620 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 KIAA2013Q8IYS2 634 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 NUDCD1Q96RS6 583 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 NOD2Q9HC29 1040 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 TTLL3Q9Y4R7 772 aa24.11■■□□□ 1.45
UBE2E3-202ENST00000410062 C10orf142B7Z368 130 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 SERPINA4P29622 427 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 MAT2AP31153 395 aaKnown RBP24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 PTPN7P35236 360 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 BCL2L1Q07817 233 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 BZW1Q7L1Q6 419 aaKnown RBP24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 TTC7BQ86TV6 843 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 ZCCHC9Q8N567 271 aaKnown RBP24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 ZNF641Q96N77 438 aaPredicted RBP24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 ALS2CR12Q96Q35 445 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 EBF2Q9HAK2 575 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 PREBQ9HCU5 417 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 DKK3Q9UBP4 350 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 FADS3Q9Y5Q0 445 aa24.1■■□□□ 1.45
UBE2E3-202ENST00000410062 NEBLO76041 1014 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 PCDH8O95206 1070 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 JCHAINP01591 159 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 TIMP2P16035 220 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 CETN2P41208 172 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 DPP6P42658 865 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 MAPK8P45983 427 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 CCR5P51681 352 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 ZBTB17Q13105 803 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 CFAP58Q5T655 872 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 CCDC181Q5TID7 509 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 ZC3H18Q86VM9 953 aaKnown RBP24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 ORAI3Q9BRQ5 295 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 CEP41Q9BYV8 373 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 POLR1EQ9GZS1 481 aaKnown RBP24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 SEPT10Q9P0V9 454 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 GGT7Q9UJ14 662 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 ITM2BQ9Y287 266 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 EFR3BQ9Y2G0 817 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 PI4KAP42356 2102 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 DOCK9Q9BZ29 2069 aa24.09■■□□□ 1.45
UBE2E3-202ENST00000410062 APOC4-APOC2K7ER74 178 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 RNGTTO60942 597 aaKnown RBP24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 APOC2P02655 101 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 CFIP05156 583 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 HLA-DQB2P05538 268 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 ITIH2P19823 946 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 CD27P26842 260 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 HOXD12P35452 270 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 TRIM61Q5EBN2 209 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 MEI1Q5TIA1 1274 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 PRR23CQ6ZRP0 262 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 ZSWIM9Q86XI8 627 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 SEMA3CQ99985 751 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 BRD8Q9H0E9 1235 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 PCDHGC4Q9Y5F7 938 aa24.08■■□□□ 1.45
UBE2E3-202ENST00000410062 A0A1W2PQU0 124 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 SPINT1O43278 529 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 GNSP15586 552 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 IFI35P80217 286 aaPredicted RBP24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 PRKD1Q15139 912 aaPredicted RBP24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 DUOXA1Q1HG43 343 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 TRIM69Q86WT6 500 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 GPR161Q8N6U8 529 aaKnown RBP24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 C1orf216Q8TAB5 229 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 TFB1MQ8WVM0 346 aaKnown RBP24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 RAB7BQ96AH8 199 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 IL12RB2Q99665 862 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 FSCN3Q9NQT6 498 aa24.08■■□□□ 1.44
UBE2E3-202ENST00000410062 PLXNA2O75051 1894 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 DMXL1Q9Y485 3027 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 A0A1W2PPC4 97 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 TSPAN11A1L157 253 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 TRAFD1O14545 582 aaPredicted RBP24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 KHNYNO15037 678 aaKnown RBP24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 BCAT2O15382 392 aaPredicted RBP24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 LATO43561 262 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 AP1G1O43747 822 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 TJP3O95049 919 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 IRX4P78413 519 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 DSC2Q02487 901 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 PAF1Q8N7H5 531 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 CNTD1Q8N815 330 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms