RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ECHDC1Q9NTX5 307 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 GRHPRQ9UBQ7 328 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 AGO2Q9UKV8 859 aaKnown RBP4.73□□□□□ -1.65
CLK1-203ENST00000409769 RAB21Q9UL25 225 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 LZTS1Q9Y250 596 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 ATP6V0A2Q9Y487 856 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 COPG1Q9Y678 874 aaKnown RBP4.73□□□□□ -1.65
CLK1-203ENST00000409769 COL1A1P02452 1464 aaPredicted RBP4.73□□□□□ -1.65
CLK1-203ENST00000409769 CCDC88AQ3V6T2 1871 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 SCN9AQ15858 1988 aa4.73□□□□□ -1.65
CLK1-203ENST00000409769 DICER1Q9UPY3 1922 aaKnown RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3DA0A087WVF3 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3IA0A087WXS9 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3EA0A087X179 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TRBV5-3A0A0A0MS03 114 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3BA6NDS4 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 KCNJ18B7U540 433 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3LB9A6J9 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 F8W810 466 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 H0YIN7 160 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 SNAP23O00161 211 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 PRPF4O43172 522 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLK1-203ENST00000409769 HNRNPRO43390 633 aaKnown RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 TCEA3O75764 348 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3HP0C7X1 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 DPEP1P16444 411 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 CPA2P48052 419 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 ADPRHP54922 357 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TRIM14Q14142 442 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 LIPMQ5VYY2 423 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 DGAT2L7PQ6IED9 249 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3CQ6IPX1 549 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 ERAP2Q6P179 960 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 CCDC174Q6PII3 467 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 DHRS13Q6UX07 377 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 TBC1D3Q8IZP1 549 aaPredicted RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 NKAPQ8N5F7 415 aaKnown RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 ENDOVQ8N8Q3 282 aaKnown RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 ARL14EPQ8N8R7 260 aaPredicted RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 OR6Y1Q8NGX8 325 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 FAM84BQ96KN1 310 aaPredicted RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 ZNF347Q96SE7 839 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 PIMREGQ9BSJ6 248 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 ELAC1Q9H777 363 aaKnown RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 G6PC2Q9NQR9 355 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 SLC22A11Q9NSA0 550 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.72□□□□□ -1.65
CLK1-203ENST00000409769 MED23Q9ULK4 1368 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 MAST2Q6P0Q8 1798 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 SBF1O95248 1867 aa4.72□□□□□ -1.65
CLK1-203ENST00000409769 RFX7Q2KHR2 1363 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 FAM90A20PA6NIJ5 464 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 IFRD1O00458 451 aaPredicted RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 TFRCP02786 760 aaKnown RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 WNT1P04628 370 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 IFIT1P09914 478 aaKnown RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 ALDOCP09972 364 aaKnown RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 UQCRFS1P1P0C7P4 283 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 SERPINA4P29622 427 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 CHKAP35790 457 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 PCP4P48539 62 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 RCAN1P53805 252 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 SMAD1Q15797 465 aaKnown RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 GALNTL6Q49A17 601 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 KIAA1755Q5JYT7 1200 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 CCDC158Q5M9N0 1113 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 JMJD6Q6NYC1 403 aaPredicted RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 OLFM4Q6UX06 510 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 RTL10Q7L3V2 364 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 GALNT15Q8N3T1 639 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 TBC1D16Q8TBP0 767 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 ZNF622Q969S3 477 aaKnown RBP eCLIP4.71□□□□□ -1.663e-8■■■□□ 17.8
CLK1-203ENST00000409769 NEUROD6Q96NK8 337 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 BOLA2Q9H3K6 86 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 SAYSD1Q9NPB0 183 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 SEMA4BQ9NPR2 832 aaPredicted RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 TMEM45AQ9NWC5 275 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 POLLQ9UGP5 575 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 IPO11Q9UI26 975 aaKnown RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 DTX4Q9Y2E6 619 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 TTC3P53804 2025 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 CDK5RAP2Q96SN8 1893 aa4.71□□□□□ -1.66
CLK1-203ENST00000409769 PDS5AQ29RF7 1337 aaKnown RBP4.71□□□□□ -1.66
CLK1-203ENST00000409769 COL4A5P29400 1685 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 MYH2Q9UKX2 1941 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 KIR2DS5A0A0G2JLQ3 304 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 A0A0G2JLW4 131 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 MCIDASD6RGH6 385 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 H0Y3Z8 333 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 KIR2DS3K7RE56 304 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 IPO5O00410 1097 aaKnown RBP4.7□□□□□ -1.66
CLK1-203ENST00000409769 UFL1O94874 794 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 HEXIM1O94992 359 aaKnown RBP4.7□□□□□ -1.66
CLK1-203ENST00000409769 LCKP06239 509 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms