RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SKOR2Q2VWA4 1001 aaPredicted RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 KCNT1Q5JUK3 1230 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 BROXQ5VW32 411 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 TRNP1Q6NT89 227 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 GCNT7Q6ZNI0 430 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 SPATS2Q86XZ4 545 aaKnown RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF653Q96CK0 615 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 PCDHB18PQ96TA0 734 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 MYOCQ99972 504 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 SUV39H2Q9H5I1 410 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNHIT6Q9NWK9 470 aaKnown RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 RCOR3Q9P2K3 495 aaPredicted RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 IP6K2Q9UHH9 426 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 SLCO1B1Q9Y6L6 691 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 A0A1B0GTH6 734 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 CACNB4O00305 520 aaPredicted RBP13□□□□□ -0.33
SNORD88B-201ENST00000408454 PLK4O00444 970 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 AREL1O15033 823 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 EPHB6O15197 1021 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 SIGLEC6O43699 453 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
SNORD88B-201ENST00000408454 PRAMEF11O60813 436 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 RASGRP1O95267 797 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 FTLP02792 175 aaPredicted RBP13□□□□□ -0.33
SNORD88B-201ENST00000408454 PYGLP06737 847 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 JUNDP17535 347 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 CES1P23141 567 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 NUMBP49757 651 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 PPARDQ03181 441 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 TRIM14Q14142 442 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 NCAPHQ15003 741 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 AGERQ15109 404 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 NR0B2Q15466 257 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 CAVIN1Q6NZI2 390 aaKnown RBP13□□□□□ -0.33
SNORD88B-201ENST00000408454 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 RFX8Q6ZV50 586 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 IRF2BP2Q7Z5L9 587 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 GKN2Q86XP6 184 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 HAUS4Q9H6D7 363 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 TMPRSS4Q9NRS4 437 aa13□□□□□ -0.33
SNORD88B-201ENST00000408454 APOBEC3BQ9UH17 382 aaKnown RBP13□□□□□ -0.33
SNORD88B-201ENST00000408454 ZFR2Q9UPR6 939 aaKnown RBP13□□□□□ -0.33
SNORD88B-201ENST00000408454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13□□□□□ -0.33
SNORD88B-201ENST00000408454 PLXNA2O75051 1894 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 A0A087WV48 116 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 TMEM191CA6NGB0 347 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 IGLON5A6NGN9 336 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 FFAR2O15552 330 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 CBFA2T2O43439 604 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 SDC3O75056 442 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 SOCS5O75159 536 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF821O75541 412 aaPredicted RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 SERPING1P05155 500 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 METAP1P53582 386 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 CDH6P55285 790 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 PFN3P60673 137 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 BNIP3Q12983 259 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 MTM1Q13496 603 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 SHBQ15464 509 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 UGP2Q16851 508 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 KLHL40Q2TBA0 621 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 TMEM52BQ4KMG9 183 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 PPP6R3Q5H9R7 873 aaPredicted RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 PRAMEF14Q5SWL7 426 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 FAXCQ5TGI0 409 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 KANSL1Q7Z3B3 1105 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 PHLDB2Q86SQ0 1253 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 DCBLD1Q8N8Z6 715 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF548Q8NEK5 533 aaPredicted RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 MAPK15Q8TD08 544 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 TEKT4Q8WW24 435 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 KLK6Q92876 244 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 HMCESQ96FZ2 354 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF578Q96N58 590 aaPredicted RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 THSD1Q9NS62 852 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 GPR27Q9NS67 375 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 ATP8A1Q9Y2Q0 1164 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 LUC7L2Q9Y383 392 aaKnown RBP12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 CHD8Q9HCK8 2581 aa12.99□□□□□ -0.33
SNORD88B-201ENST00000408454 CEP295Q9C0D2 2601 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 TCRBV5S1A1TA0A578 114 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 LMO7DNF2Z398 122 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 FAM72CH0Y354 149 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 MYO1FO00160 1098 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 MT-CO3P00414 261 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 ELFN1P0C7U0 828 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 CYP2A6P11509 494 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms