RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 NPIPB4C9JG80 1138 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 NKX2-8O15522 239 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 CTNND1O60716 968 aaKnown RBP1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 CAVIN2O95810 425 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 DCTP40126 519 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 RAB27AP51159 221 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 EPHB1P54762 984 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 ECT2LQ008S8 904 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 PTPROQ16827 1216 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 ATP13A5Q4VNC0 1218 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 CXorf57Q6NSI4 855 aaKnown RBP1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 CCDC129Q6ZRS4 1044 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 RNF44Q7L0R7 432 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 CCDC105Q8IYK2 499 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 TBC1D22AQ8WUA7 517 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 FAR1Q8WVX9 515 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 MCRS1Q96EZ8 462 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 APIPQ96GX9 242 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 GPATCH3Q96I76 525 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 ST6GAL2Q96JF0 529 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 SNX22Q96L94 193 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 C1orf112Q9NSG2 853 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 ZIM2Q9NZV7 527 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 SLC12A4Q9UP95 1085 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 EXOGQ9Y2C4 368 aaKnown RBP1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 PKP3Q9Y446 797 aa1.37□□□□□ -2.19
MIR548I3-201ENST00000408378 A0A087WZ62 844 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 A0A0G2JLW4 131 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 GOLIM4O00461 696 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 MGEA5O60502 916 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 IGSF3O75054 1194 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 ANXA2P07355 339 aaKnown RBP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 PDGFRBP09619 1106 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 U2AF1L5P0DN76 240 aaPredicted RBP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 ERVK-10P10266 1014 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 ITGA2P17301 1181 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 PEX2P28328 305 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 GRK5P34947 590 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 U2AF1Q01081 240 aaKnown RBP eCLIP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 AAK1Q2M2I8 961 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 ARHGAP15Q53QZ3 475 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 WDR38Q5JTN6 314 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 SIRPB2Q5JXA9 342 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 PAQR6Q6TCH4 344 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 TMEM64Q6YI46 380 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 CCNI2Q6ZMN8 369 aaPredicted RBP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 ZC3HC1Q86WB0 502 aaKnown RBP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 TICAM1Q8IUC6 712 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 MB21D2Q8IYB1 491 aaPredicted RBP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 SLC39A11Q8N1S5 342 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 ATP11CQ8NB49 1132 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 STAG1Q8WVM7 1258 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 IQCDQ96DY2 449 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 PIGQQ9BRB3 760 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 LRRC1Q9BTT6 524 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 IFT27Q9BW83 186 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 BTBD1Q9H0C5 482 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 PLEKHA5Q9HAU0 1116 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 KCNK9Q9NPC2 374 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 NOP58Q9Y2X3 529 aaKnown RBP1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 MOB4Q9Y3A3 225 aa1.36□□□□□ -2.19
MIR548I3-201ENST00000408378 A0A0U1RQF3 1178 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 GXYLT2A0PJZ3 443 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 HMX3A6NHT5 357 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 CLCA1A8K7I4 914 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 RHPN2P1A8MT19 583 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 F8W8V4 182 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 SCGB1D2O95969 90 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 ZBED1O96006 694 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 HRGP04196 525 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 HNRNPA1P09651 372 aaKnown RBP eCLIP1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 IBSPP21815 317 aaPredicted RBP1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 DCTDP32321 178 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 DRD3P35462 400 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 PTGER3P43115 390 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 LIMK2P53671 638 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 FAM193AP78312 1265 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 GRAPQ13588 217 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 CCNYL2Q5T2Q4 361 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 FAM102BQ5T8I3 360 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 VWA5B1Q5TIE3 1220 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 RNF220Q5VTB9 566 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 NXNQ6DKJ4 435 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 MRNIPQ6NTE8 343 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 FAM122CQ6P4D5 195 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 WDR73Q6P4I2 378 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 CCDC149Q6ZUS6 474 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 TRPT1Q86TN4 253 aaKnown RBP1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 WDR5BQ86VZ2 330 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 TMEM219Q86XT9 240 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 CCDC28AQ8IWP9 274 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 SDR16C5Q8N3Y7 309 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 FAM156AQ8NDB6 213 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 CLEC4CQ8WTT0 213 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 SLC20A1Q8WUM9 679 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 ZNRF4Q8WWF5 429 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 ATOH1Q92858 354 aaPredicted RBP1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 LRRC46Q96FV0 321 aa1.35□□□□□ -2.19
MIR548I3-201ENST00000408378 MMTAG2Q9BU76 263 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms