RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IZUMO2Q6UXV1 221 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CPSF7Q8N684 471 aaKnown RBP17■□□□□ 0.31
NUP50-203ENST00000407019 SLC26A7Q8TE54 656 aa17■□□□□ 0.31
NUP50-203ENST00000407019 HEXDCQ8WVB3 486 aa17■□□□□ 0.31
NUP50-203ENST00000407019 PYDC1Q8WXC3 89 aa17■□□□□ 0.31
NUP50-203ENST00000407019 OMDQ99983 421 aa17■□□□□ 0.31
NUP50-203ENST00000407019 UNKQ9C0B0 810 aaKnown RBP17■□□□□ 0.31
NUP50-203ENST00000407019 SP110Q9HB58 689 aa17■□□□□ 0.31
NUP50-203ENST00000407019 VPS45Q9NRW7 570 aa17■□□□□ 0.31
NUP50-203ENST00000407019 CLIC5Q9NZA1 410 aa17■□□□□ 0.31
NUP50-203ENST00000407019 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
NUP50-203ENST00000407019 RGSL1A5PLK6 1076 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 J3KR12 359 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 GRK4P32298 578 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 PPARGP37231 505 aaPredicted RBP16.99■□□□□ 0.31
NUP50-203ENST00000407019 CD86P42081 329 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 CLCN5P51795 746 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 MTTPP55157 894 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 MAXP61244 160 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 USP46P62068 366 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 SLC24A5Q71RS6 500 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 SETD3Q86TU7 594 aaPredicted RBP16.99■□□□□ 0.31
NUP50-203ENST00000407019 RTN4RL1Q86UN2 441 aaPredicted RBP16.99■□□□□ 0.31
NUP50-203ENST00000407019 SNX32Q86XE0 403 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 HPS6Q86YV9 775 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 COLGALT2Q8IYK4 626 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 ATP6V0D2Q8N8Y2 350 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 KLHL5Q96PQ7 755 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 POMKQ9H5K3 350 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 ZNF385DQ9H6B1 395 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 NCKIPSDQ9NZQ3 722 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 PRG3Q9Y2Y8 225 aaPredicted RBP16.99■□□□□ 0.31
NUP50-203ENST00000407019 PLXNA3P51805 1871 aa16.99■□□□□ 0.31
NUP50-203ENST00000407019 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 AURKAO14965 403 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 CNTN5O94779 1100 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 SNUPNO95149 360 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 HAPLN1P10915 354 aaPredicted RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 ATP5F1P24539 256 aaPredicted RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 ADSLP30566 484 aaPredicted RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 NUDT2P50583 147 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 DNAJB13P59910 316 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 SLC10A7Q0GE19 358 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 EFEMP1Q12805 493 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 LBRQ14739 615 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 PSMD5Q16401 504 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 RBM20Q5T481 1227 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 TMEM154Q6P9G4 183 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 C16orf89Q6UX73 402 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 PIWIL4Q7Z3Z4 852 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 DHDDSQ86SQ9 333 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 TXNDC5Q8NBS9 432 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 RP9Q8TA86 221 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 UCMAQ8WVF2 138 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 PABPC5Q96DU9 382 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 SPDL1Q96EA4 605 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 ECSITQ9BQ95 431 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 NMRK2Q9NPI5 230 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 IGSF5Q9NSI5 407 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 PRPF19Q9UMS4 504 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 G3BP2Q9UN86 482 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 DNAH12Q6ZR08 3092 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 AIM2O14862 343 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 KIF1CO43896 1103 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 PRKAR2AP13861 404 aaKnown RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 MAGEA11P43364 429 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 DSC2Q02487 901 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 CSHL1Q14406 222 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 PDCD2Q16342 344 aaPredicted RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 ALFQ53S48 1182 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 TCHHL1Q5QJ38 904 aaPredicted RBP16.98■□□□□ 0.31
NUP50-203ENST00000407019 NXNQ6DKJ4 435 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 SGF29Q96ES7 293 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 CATSPER2Q96P56 530 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 NDNQ99608 321 aa16.98■□□□□ 0.31
NUP50-203ENST00000407019 IGLV3-10A0A075B6K4 115 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 BUD23O43709 281 aaKnown RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 PAPSS2O95340 614 aaPredicted RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 MMP2P08253 660 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 CKBP12277 381 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 LEPRP48357 1165 aaKnown RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 CYLC2Q14093 348 aaPredicted RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 FAM83EQ2M2I3 478 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TECRLQ5HYJ1 363 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 PPM1LQ5SGD2 360 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 AGAP9Q5VTM2 703 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 ZNF280DQ6N043 979 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TRIM67Q6ZTA4 783 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 EFCAB3Q8N7B9 438 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 KDM1BQ8NB78 822 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 PSMG2Q969U7 264 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 TSPAN17Q96FV3 270 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 BTN2A3PQ96KV6 586 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 FAM193BQ96PV7 902 aaPredicted RBP16.97■□□□□ 0.31
NUP50-203ENST00000407019 OLFM1Q99784 485 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 VCXQ9H320 206 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 SUFUQ9UMX1 484 aa16.97■□□□□ 0.31
NUP50-203ENST00000407019 FRMPD3Q5JV73 1810 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms