RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 BUD31P41223 144 aaPredicted RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 PFKPQ01813 784 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ITGADQ13349 1161 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 TAF8Q7Z7C8 310 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 C1QTNF1Q9BXJ1 281 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ZFP14Q9HCL3 533 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 CCDC162PA2VCL2 907 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 FDPSP14324 419 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 PSMB4P28070 264 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 NR1D2Q14995 579 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 DENND1CQ8IV53 801 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 PTCD3Q96EY7 689 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 CRELD1Q96HD1 420 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 MRPL57Q9BQC6 102 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 E5RJQ4 531 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SNAP91O60641 907 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SERPINB7O75635 380 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 GRIA3P42263 894 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 CYP4F2P78329 520 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 CYP4F3Q08477 520 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 PCID2Q5JVF3 399 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 KIAA1324Q6UXG2 1013 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 KATNAL2Q8IYT4 538 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 FUT8Q9BYC5 575 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 RIOX1Q9H6W3 641 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF222Q9UK12 451 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 TBC1D25Q3MII6 688 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ABRAXAS1Q6UWZ7 409 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 HAVCR1Q96D42 359 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 PAX3P23760 479 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 TTKP33981 857 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 IRF8Q02556 426 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SERPINA13PQ6UXR4 307 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 OTOP1Q7RTM1 612 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 DEFB106AQ8N104 65 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 IPCEF1Q8WWN9 437 aaPredicted RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SENP8Q96LD8 212 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 LMAN2LQ9H0V9 348 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 ETNK2Q9NVF9 386 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 ST3GAL5Q9UNP4 418 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 PCDHB9Q9Y5E1 797 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SIGLEC16A6NMB1 481 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 CCNDBP1O95273 360 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 DPYSL3Q14195 570 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 PPP3R2Q96LZ3 170 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 ADAM2Q99965 735 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 C3orf18Q9UK00 162 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 MFHAS1Q9Y4C4 1052 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 A0A0A0MRY4 1105 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 TBL1XO60907 577 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 H2AFXP16104 143 aaPredicted RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 FAM46CQ5VWP2 391 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 B3GNT6Q6ZMB0 384 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 OAFQ86UD1 273 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 KIAA0895Q8NCT3 520 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SPATA13Q96N96 652 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 GSAPA4D1B5 854 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 CAPGP40121 348 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 RARRES1P49788 294 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 TOB1P50616 345 aaPredicted RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 RNF148Q8N7C7 305 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 PYDC1Q8WXC3 89 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 CORO1BQ9BR76 489 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 PTGFRNQ9P2B2 879 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SLC12A4Q9UP95 1085 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SPIBQ01892 262 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 TAF5Q15542 800 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 LLGL2Q6P1M3 1020 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 FERD3LQ96RJ6 166 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 TBC1D30Q9Y2I9 924 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 ABHD14A-ACY1A0A1B0GW23 586 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 PTPN1P18031 435 aaKnown RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 USP41Q3LFD5 358 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 BROXQ5VW32 411 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 NEPROQ6NW34 567 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 ZCCHC23Q6ZST2 131 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 BPIFB6Q8NFQ5 453 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 CAB39LQ9H9S4 337 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 MTF2Q9Y483 593 aaPredicted RBP12.13□□□□□ -0.47
SMCR8-201ENST00000406438 GMPPBQ9Y5P6 360 aa12.13□□□□□ -0.47
SMCR8-201ENST00000406438 ADH1CP00326 375 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 ALADP13716 330 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PDX1P52945 283 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 USP46P62068 366 aa12.12□□□□□ -0.47
SMCR8-201ENST00000406438 PUDPQ08623 228 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms