RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PRPSAP1Q14558 356 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 CST6Q15828 149 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 PCSK7Q16549 785 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 C4orf22Q6V702 233 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 MMGT1Q8N4V1 131 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 LRRN4CLQ8ND94 238 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 KLHL32Q96NJ5 620 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 OSBPL1AQ9BXW6 950 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 SUV39H2Q9H5I1 410 aa33.62■■■□□ 2.97
CSNK1E-204ENST00000403904 TERF1P54274 439 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 SYCP2LQ5T4T6 812 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 ANO7Q6IWH7 933 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 SYDE1Q6ZW31 735 aaPredicted RBP33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 KDELC2Q7Z4H8 507 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 PDCD6IPQ8WUM4 868 aaKnown RBP33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 C11orf16Q9NQ32 467 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 RRAGDQ9NQL2 400 aaPredicted RBP33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 ASIC3Q9UHC3 531 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 CACNA1IQ9P0X4 2223 aa33.61■■■□□ 2.97
CSNK1E-204ENST00000403904 C1QTNF3-AMACRE9PGA6 284 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 TRAFD1O14545 582 aaPredicted RBP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 ANXA9O76027 345 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 SLC8A1P32418 973 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 FDFT1P37268 417 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 CCR3P51677 355 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 MAMSTRQ6ZN01 415 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 SIPA1Q96FS4 1042 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 ZNF641Q96N77 438 aaPredicted RBP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 VPS45Q9NRW7 570 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 AAR2Q9Y312 384 aaKnown RBP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 MID1O15344 667 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 GEMP55040 296 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 BASP1P80723 227 aaKnown RBP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 FAM46CQ5VWP2 391 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 KDELC1Q6UW63 502 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 PRCCQ92733 491 aaPredicted RBP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 LRRC1Q9BTT6 524 aa33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 TDRD1Q9BXT4 1180 aaKnown RBP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 BCCIPQ9P287 314 aaKnown RBP eCLIP33.6■■■□□ 2.97
CSNK1E-204ENST00000403904 SOCS5O75159 536 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 MPP3Q13368 585 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 ZNF805Q5CZA5 627 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 C8orf74Q6P047 294 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 KIAA1324Q6UXG2 1013 aaKnown RBP33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 PGBD3Q8N328 593 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 PDCD7Q8N8D1 485 aaKnown RBP33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 MDGA1Q8NFP4 955 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 IPMKQ8NFU5 416 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 PPP1R2P1Q96PQ5 205 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 CHKBQ9Y259 395 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 PCDHB9Q9Y5E1 797 aa33.59■■■□□ 2.97
CSNK1E-204ENST00000403904 FAM187AA6NFU0 413 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 HTRA2O43464 458 aaPredicted RBP33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 ALDH1A2O94788 518 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 ADH1BP00325 375 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 PDHA1P08559 390 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 ADCY8P40145 1251 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 WNT3AP56704 352 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 SEMA5AQ13591 1074 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 SLC14A2Q15849 920 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 PAF1Q8N7H5 531 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 CCHCR1Q8TD31 782 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 ARRDC3Q96B67 414 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 MRGPRX2Q96LB1 330 aa33.58■■■□□ 2.97
CSNK1E-204ENST00000403904 PLK4O00444 970 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 DNTTP04053 509 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 CFAP58Q5T655 872 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 ZSWIM9Q86XI8 627 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 KLHDC8BQ8IXV7 354 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 ECHDC3Q96DC8 303 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 TRIM31Q9BZY9 425 aa33.57■■■□□ 2.96
CSNK1E-204ENST00000403904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 E7EVH7 732 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 APBB3O95704 486 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 C5AR1P21730 350 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 PXNP49023 591 aaPredicted RBP33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 OLIG2Q13516 323 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 SPARCL1Q14515 664 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 ARMC12Q5T9G4 340 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 AADATQ8N5Z0 425 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 PPP1R16AQ96I34 528 aa33.56■■■□□ 2.96
CSNK1E-204ENST00000403904 GOLGA6CA6NDK9 693 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 GOLGA6BA6NDN3 693 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 C16orf96A6NNT2 1141 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 K7ESF4 209 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 PGLSO95336 258 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 PRLP01236 227 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 APRTP07741 180 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 GOLGA6DP0CG33 693 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 C7P10643 843 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 CA4P22748 312 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 ITGB7P26010 798 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 AVPR2P30518 371 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 SLC7A5Q01650 507 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 CDK18Q07002 472 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 KCTD11Q693B1 232 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 CAMKK1Q8N5S9 505 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 DTWD2Q8NBA8 298 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 IFT43Q96FT9 208 aa33.55■■■□□ 2.96
CSNK1E-204ENST00000403904 FSD1LQ9BXM9 530 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms