RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GOLGA8TH3BQL2 631 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 BEST1O76090 585 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 CTSHP09668 335 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 TPH1P17752 444 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 WARSP23381 471 aaKnown RBP20.04■□□□□ 0.8
CCDC47-202ENST00000403162 THPOP40225 353 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 PPP2R5DQ14738 602 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SNX17Q15036 470 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SV2CQ496J9 727 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SH2D4BQ5SQS7 431 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 CNTN4Q8IWV2 1026 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 KLHDC8BQ8IXV7 354 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 ASB9Q96DX5 294 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 TEKT5Q96M29 485 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 PRPF18Q99633 342 aaKnown RBP20.04■□□□□ 0.8
CCDC47-202ENST00000403162 CRISPLD2Q9H0B8 497 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 ANLNQ9NQW6 1124 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 EPS15L1Q9UBC2 864 aa20.04■□□□□ 0.8
CCDC47-202ENST00000403162 SHROOM3Q8TF72 1996 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 ARHGAP10A1A4S6 786 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 I6L893 689 aaPredicted RBP20.03■□□□□ 0.8
CCDC47-202ENST00000403162 HUS1O60921 280 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 FYNP06241 537 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 ATP6V1B1P15313 513 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 NR1H2P55055 460 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 PTK2BQ14289 1009 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 UGP2Q16851 508 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 LINC00523Q86TU6 105 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 OSTM1Q86WC4 334 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 TMEM40Q8WWA1 233 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 TOP1MTQ969P6 601 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 MARK4Q96L34 752 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 GPR78Q96P69 363 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 MRPL40Q9NQ50 206 aaKnown RBP20.03■□□□□ 0.8
CCDC47-202ENST00000403162 MRGBPQ9NV56 204 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 XPR1Q9UBH6 696 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 SUCOQ9UBS9 1254 aaKnown RBP20.03■□□□□ 0.8
CCDC47-202ENST00000403162 FBXW11Q9UKB1 542 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 ACOT9Q9Y305 439 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 TRPV2Q9Y5S1 764 aa20.03■□□□□ 0.8
CCDC47-202ENST00000403162 SMIM28A0A1B0GU29 152 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 C9IYK1 514 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 CLDN5O00501 218 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 PSMD3O43242 534 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 RNASEH2AO75792 299 aaKnown RBP20.02■□□□□ 0.8
CCDC47-202ENST00000403162 AHSGP02765 367 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 C8BP07358 591 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 ZNF26P17031 533 aaPredicted RBP20.02■□□□□ 0.8
CCDC47-202ENST00000403162 SAT1P21673 171 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 GABRB3P28472 473 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 PRPSAP1Q14558 356 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 IYDQ6PHW0 289 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 CLEC20AQ6ZU45 233 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 PAQR9Q6ZVX9 377 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 SLC41A1Q8IVJ1 513 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 PELI3Q8N2H9 469 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 GALNT4Q8N4A0 578 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 DPF3Q92784 378 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 TMA16Q96EY4 203 aaKnown RBP20.02■□□□□ 0.8
CCDC47-202ENST00000403162 NPAS2Q99743 824 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 SDHDO14521 159 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 XPOTO43592 962 aaKnown RBP20.02■□□□□ 0.8
CCDC47-202ENST00000403162 RPLP2P05387 115 aaKnown RBP20.02■□□□□ 0.8
CCDC47-202ENST00000403162 AKAP5P24588 427 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 AVPR1AP37288 418 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 RAB10P61026 200 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 TSTD2Q5T7W7 516 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 TOP6BLQ8N6T0 577 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 CEP70Q8NHQ1 597 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 ZSCAN18Q8TBC5 510 aaPredicted RBP20.02■□□□□ 0.8
CCDC47-202ENST00000403162 TSPAN18Q96SJ8 248 aa20.02■□□□□ 0.8
CCDC47-202ENST00000403162 CCDC160A6NGH7 325 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 TKTL1P51854 596 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 ZNF135P52742 658 aaPredicted RBP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 MGAT5BQ3V5L5 792 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 ISLR2Q6UXK2 745 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PIWIL4Q7Z3Z4 852 aaKnown RBP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 CHERPQ8IWX8 916 aaKnown RBP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PGAP3Q96FM1 320 aaPredicted RBP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 MRPL1Q9BYD6 325 aaKnown RBP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 THEGQ9P2T0 379 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PCDHGA7Q9Y5G6 932 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 NRP1O14786 923 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 CHRNA1P02708 482 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 KCNE1P15382 129 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PSMC3P17980 439 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PGGT1BP53609 377 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 DNAJB13P59910 316 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PSME3P61289 254 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 PCBP1Q15365 356 aaKnown RBP eCLIP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 XKR4Q5GH76 650 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 CHSY3Q70JA7 882 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 MRPL46Q9H2W6 279 aaKnown RBP20.01■□□□□ 0.79
CCDC47-202ENST00000403162 NCKIPSDQ9NZQ3 722 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 HSFX1Q9UBD0 423 aa20.01■□□□□ 0.79
CCDC47-202ENST00000403162 CACNG3O60359 315 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 PTPN1P18031 435 aaKnown RBP20■□□□□ 0.79
CCDC47-202ENST00000403162 ATXN3P54252 364 aaPredicted RBP20■□□□□ 0.79
CCDC47-202ENST00000403162 TRIM25Q14258 630 aaKnown RBP20■□□□□ 0.79
CCDC47-202ENST00000403162 PCID2Q5JVF3 399 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms