RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 AGAP2Q99490 1192 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 EPN3Q9H201 632 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 IGFLR1Q9H665 355 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 TREX1Q9NSU2 369 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 ABCB8Q9NUT2 735 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 TXNDC16Q9P2K2 825 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 LHX3Q9UBR4 397 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SLC2A6Q9UGQ3 507 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 INTS6Q9UL03 887 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 RANBP2P49792 3224 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 GMNCA6NCL1 334 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 SLC9A3R1O14745 358 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 RFPL1O75677 317 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 VAPBO95292 243 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 PAPSS2O95340 614 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 PYGBP11216 843 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 ALADP13716 330 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 PAMP19021 973 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 CA4P22748 312 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 RPA3P35244 121 aaPredicted RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 ARCN1P48444 511 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 SEC24CP53992 1094 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 RHOAP61586 193 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 BMPR2Q13873 1038 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 LY6G5CQ5SRR4 150 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 NCEH1Q6PIU2 408 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 LRRC3BQ96PB8 259 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 BBS2Q9BXC9 721 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 CCDC134Q9H6E4 229 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 MLXIPLQ9NP71 852 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 IARS2Q9NSE4 1012 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 CHKBQ9Y259 395 aa13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 FCF1Q9Y324 198 aaKnown RBP13.42□□□□□ -0.26
CEACAM1-206ENST00000403136 CXorf51AA0A1B0GTR3 108 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 NEDD8-MDP1E9PL57 170 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 K7ERQ8 282 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 SMAD6O43541 496 aaKnown RBP13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 PRLP01236 227 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 HLA-FP30511 346 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 WDR4P57081 412 aaKnown RBP13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 PITRM1Q5JRX3 1037 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 RALGPS1Q5JS13 557 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 TSTD2Q5T7W7 516 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 NLRP9Q7RTR0 991 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 STRA8Q7Z7C7 330 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 KIAA1958Q8N8K9 716 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 DYDC1Q8WWB3 177 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 ATP2A3Q93084 1043 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 NSMCE4AQ9NXX6 385 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 PCDHGC4Q9Y5F7 938 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 RAI2Q9Y5P3 530 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
CEACAM1-206ENST00000403136 MROH6A6NGR9 719 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 GOLGA8TH3BQL2 631 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 ZWINTO95229 277 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 ASMTLO95671 621 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 ITGA2BP08514 1039 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 TYRP14679 529 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 ARNTP27540 789 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 GALNT3Q14435 633 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 TMEM184AQ6ZMB5 413 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 GPR149Q86SP6 731 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 SRLQ86TD4 932 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 BRSK1Q8TDC3 778 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 BCAS4Q8TDM0 211 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 CKAP2Q8WWK9 683 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 TDRD1Q9BXT4 1180 aaKnown RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 MARK1Q9P0L2 795 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 LDB2O43679 373 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 PDHA1P08559 390 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 FSHRP23945 695 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 BMP8BP34820 402 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 VIPR2P41587 438 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 CSE1LP55060 971 aaKnown RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 THOC5Q13769 683 aaKnown RBP13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 TAX1BP1Q86VP1 789 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 CNTN4Q8IWV2 1026 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 NPAS3Q8IXF0 933 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 BLOC1S5Q8TDH9 187 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 TCP10LQ8TDR4 215 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 RMDN1Q96DB5 314 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 CCT8L2Q96SF2 557 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 RBBP8Q99708 897 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 RABEP2Q9H5N1 569 aa13.4□□□□□ -0.26
CEACAM1-206ENST00000403136 COPEO14579 308 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 TM9SF1O15321 606 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 SIN3BO75182 1162 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 CCNFP41002 786 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 CTSOP43234 321 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms