RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 MAP3K6O95382 1288 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 PIGNO95427 931 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 MAT2AP31153 395 aaKnown RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 CTNNA1P35221 906 aaKnown RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 ABL2P42684 1182 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 MMP13P45452 471 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ID4P47928 161 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 MARCKSL1P49006 195 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SCNN1BP51168 640 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SUOXP51687 545 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 AP1S1P61966 158 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 BNC1Q01954 994 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ZNF235Q14590 738 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ZNF284Q2VY69 593 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TMEM259Q4ZIN3 620 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TIGD7Q6NT04 549 aaPredicted RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 TTC7BQ86TV6 843 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 CAMK1DQ8IU85 385 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 LRRC8AQ8IWT6 810 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 BBS5Q8N3I7 341 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 PGBD5Q8N414 524 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 EXD1Q8NHP7 514 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 KRT35Q92764 455 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 FEM1CQ96JP0 617 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 NSMCE3Q96MG7 304 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ATP13A3Q9H7F0 1226 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ZFR2Q9UPR6 939 aaKnown RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 PCDHA3Q9Y5H8 950 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ASCC3Q8N3C0 2202 aaKnown RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 CNOT1A5YKK6 2376 aaKnown RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 GRID2IPA4D2P6 1211 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 GOLGA6L3A6NEY3 463 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TM4SF5O14894 197 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SPINT1O43278 529 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 GJB3O75712 270 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 PCDH8O95206 1070 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TIMP2P16035 220 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 GRIK2Q13002 908 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 PUM1Q14671 1186 aaKnown RBP eCLIP19.41■□□□□ 0.7
RTN4-207ENST00000402434 TEAD4Q15561 434 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SETMARQ53H47 684 aaPredicted RBP19.41■□□□□ 0.7
RTN4-207ENST00000402434 TFDP3Q5H9I0 405 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 RALGPS1Q5JS13 557 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 BRAT1Q6PJG6 821 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SPOCD1Q6ZMY3 1216 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ZSCAN30Q86W11 494 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SPOCK2Q92563 424 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ECHDC3Q96DC8 303 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SERAC1Q96JX3 654 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 SLC6A18Q96N87 628 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 NUDCD1Q96RS6 583 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 RTKNQ9BST9 563 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 TRIM10Q9UDY6 481 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 HEY1Q9Y5J3 304 aa19.41■□□□□ 0.7
RTN4-207ENST00000402434 ADAMTS9Q9P2N4 1935 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 CABIN1Q9Y6J0 2220 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 A0A1B0GVT2 93 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 C4orf47A7E2U8 309 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 TRAFD1O14545 582 aaPredicted RBP19.4■□□□□ 0.7
RTN4-207ENST00000402434 WNT9AO14904 365 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 VILLO15195 856 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 SERPINA4P29622 427 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 RPS21P63220 83 aaKnown RBP19.4■□□□□ 0.7
RTN4-207ENST00000402434 PPIDQ08752 370 aaKnown RBP19.4■□□□□ 0.7
RTN4-207ENST00000402434 SEL1L3Q68CR1 1132 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 NAPEPLDQ6IQ20 393 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 KIAA1161Q6NSJ0 714 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 RFX6Q8HWS3 928 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 ZNF830Q96NB3 372 aaPredicted RBP19.4■□□□□ 0.7
RTN4-207ENST00000402434 OLFM3Q96PB7 478 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 AMACRQ9UHK6 382 aa19.4■□□□□ 0.7
RTN4-207ENST00000402434 PLXNA2O75051 1894 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.39■□□□□ 0.69
RTN4-207ENST00000402434 A0A1W2PR77 199 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 MACROD2A1Z1Q3 448 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 CCDC66A2RUB6 948 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 PRAMEF26H0Y7S4 382 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 KRT10P13645 584 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 CCNB1P14635 433 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 CTNNA2P26232 953 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 CD38P28907 300 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 NR2C2P49116 596 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 PEX5P50542 639 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 ATXN3P54252 364 aaPredicted RBP19.39■□□□□ 0.69
RTN4-207ENST00000402434 BCL2L1Q07817 233 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 TFDP2Q14188 446 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 PDK1Q15118 436 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 UGP2Q16851 508 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 ALG1LQ6GMV1 187 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 NT5DC3Q86UY8 548 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 MINDY1Q8N5J2 469 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 RNF10Q8N5U6 811 aaKnown RBP19.39■□□□□ 0.69
RTN4-207ENST00000402434 RBM41Q96IZ5 413 aaKnown RBP19.39■□□□□ 0.69
RTN4-207ENST00000402434 LGMNQ99538 433 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 GTPBP2Q9BX10 602 aaKnown RBP19.39■□□□□ 0.69
RTN4-207ENST00000402434 C1QTNF2Q9BXJ5 285 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 NOD2Q9HC29 1040 aa19.39■□□□□ 0.69
RTN4-207ENST00000402434 DNAAF2Q9NVR5 837 aaKnown RBP19.39■□□□□ 0.69
RTN4-207ENST00000402434 ANKRD6Q9Y2G4 727 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms