RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ASB12Q8WXK4 309 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 FTSJ1Q9UET6 329 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 ANAPC7Q9UJX3 599 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 COL5A1P20908 1838 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-203ENST00000400772 DFFAO00273 331 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 PALMO75781 387 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 LDOC1O95751 146 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-203ENST00000400772 AMPD1P23109 780 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 DNAJC3Q13217 504 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 KYAT3Q6YP21 454 aaKnown RBP16.04■□□□□ 0.16
ATG4B-203ENST00000400772 KDM7AQ6ZMT4 941 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 TMPRSS7Q7RTY8 843 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 CPNE8Q86YQ8 564 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 TSEN2Q8NCE0 465 aaKnown RBP16.04■□□□□ 0.16
ATG4B-203ENST00000400772 HCAR2Q8TDS4 363 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 TSC1Q92574 1164 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 HSPH1Q92598 858 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 CENPTQ96BT3 561 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 CNDP2Q96KP4 475 aaKnown RBP16.04■□□□□ 0.16
ATG4B-203ENST00000400772 NSMCE3Q96MG7 304 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 CSPG4P5Q96PW8 444 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 DNAJC7Q99615 494 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 SUV39H2Q9H5I1 410 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
ATG4B-203ENST00000400772 IP6K2Q9UHH9 426 aa16.04■□□□□ 0.16
ATG4B-203ENST00000400772 TSPAN11A1L157 253 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 A6NNZ2 444 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 H3BRJ5 948 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 NEMP1O14524 444 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 ENC1O14682 589 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 MUSKO15146 869 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 MMP20O60882 483 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 KRT37O76014 449 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 CAPNS1P04632 268 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 TPM3P06753 285 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 IL4RP24394 825 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 CSNK1DP48730 415 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 IL10RBQ08334 325 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 SGCGQ13326 291 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 TPRG1LQ5T0D9 272 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 SPECC1LQ69YQ0 1117 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 ZSWIM9Q86XI8 627 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 MARCH9Q86YJ5 346 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 CAMK1DQ8IU85 385 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 VSTM4Q8IW00 320 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 LZTR1Q8N653 840 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 OR8K1Q8NGG5 319 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 FAM174AQ8TBP5 190 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 TEKT4Q8WW24 435 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 PACSIN1Q9BY11 444 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 PCDH18Q9HCL0 1135 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 UCKL1Q9NWZ5 548 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 IPO11Q9UI26 975 aaKnown RBP16.03■□□□□ 0.16
ATG4B-203ENST00000400772 PTPRBP23467 1997 aa16.03■□□□□ 0.16
ATG4B-203ENST00000400772 EPG5Q9HCE0 2579 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 ZFHX4Q86UP3 3567 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 MYO1FO00160 1098 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 TRIM38O00635 465 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 CBFA2T2O43439 604 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 PEX11BO96011 259 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 GIMD1P0DJR0 217 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 DGKAP23743 735 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 NSUN2Q08J23 767 aaKnown RBP eCLIP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 FZD2Q14332 565 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 SMAD1Q15797 465 aaKnown RBP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 SLC18A3Q16572 532 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 UGP2Q16851 508 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 TMEM52BQ4KMG9 183 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 ZNF542PQ5EBM4 170 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 PTAR1Q7Z6K3 402 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 SRLQ86TD4 932 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 DCP2Q8IU60 420 aaKnown RBP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 RNF214Q8ND24 703 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 FAM71BQ8TC56 605 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 IFT43Q96FT9 208 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 ZNF641Q96N77 438 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-203ENST00000400772 TUBGCP5Q96RT8 1024 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 SP110Q9HB58 689 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 ZMIZ1Q9ULJ6 1067 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 PCDHGA1Q9Y5H4 931 aa16.02■□□□□ 0.16
ATG4B-203ENST00000400772 SPTY2D1-AS1A0A0U1RR47 76 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 FPGTO14772 594 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 CD48P09326 243 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 ARL4AP40617 200 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 RABIFP47224 123 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 ACADVLP49748 655 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 SUOXP51687 545 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 ARSEP51690 589 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 PFN3P60673 137 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 SLC10A7Q0GE19 358 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 GRM3Q14832 879 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 PROX2Q3B8N5 592 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 ATP13A4Q4VNC1 1196 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 CCDC157Q569K6 752 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 DHRS13Q6UX07 377 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms