RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ARHGAP17Q68EM7 881 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 TIFABQ6ZNK6 161 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 FIBCD1Q8N539 461 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CLHC1Q8NHS4 586 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 FAM45AQ8TCE6 357 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PHOX2BQ99453 314 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 DHRS9Q9BPW9 319 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CINPQ9BW66 212 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 IL22Q9GZX6 179 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SERHL2Q9H4I8 314 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SERHLQ9NQF3 203 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 AGO2Q9UKV8 859 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 BUD23O43709 281 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF182P17025 639 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 LBPP18428 481 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 HPCAL1P37235 193 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ABATP80404 500 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 RHAGQ02094 409 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 UBE3AQ05086 875 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 COL9A3Q14050 684 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 FUT11Q495W5 492 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ATG16L2Q8NAA4 619 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 MYLPFQ96A32 169 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SH3KBP1Q96B97 665 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SERAC1Q96JX3 654 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 FAM84AQ96KN4 292 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 NPLQ9BXD5 320 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CLPBQ9H078 707 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PPA2Q9H2U2 334 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 DBNDD1Q9H9R9 158 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 IL20Q9NYY1 176 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SIRPGQ9P1W8 387 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 LINC00854A0A1B0GVQ3 168 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 FAM92AA1XBS5 289 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PLIN3O60664 434 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ITGB3P05106 788 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CYP2C8P10632 490 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ATP5F1P24539 256 aaPredicted RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SDC2P34741 201 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 SLC7A2P52569 658 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 FSCN1Q16658 493 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CACHD1Q5VU97 1274 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 TAGAPQ8N103 731 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 MCOLN3Q8TDD5 553 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 AKAP1Q92667 903 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ALPK1Q96QP1 1244 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 OR6C70A6NIJ9 312 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ERI2A8K979 691 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 BCKDKO14874 412 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 S100A6P06703 90 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 TSPAN19P0C672 248 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ACO1P21399 889 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 HTR2BP41595 481 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 GRIA4P48058 902 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PLIN5Q00G26 463 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 LGALS3BPQ08380 585 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF543Q08ER8 600 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 GTF2H3Q13889 308 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 GALNT3Q14435 633 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM71Q2Q1W2 868 aaKnown RBP10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PAOXQ6QHF9 649 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 IDO2Q6ZQW0 420 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF597Q96LX8 424 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 Q96MT0 163 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 PWWP2AQ96N64 755 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 RIT2Q99578 217 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 MED28Q9H204 178 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 CPVLQ9H3G5 476 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 DUSP12Q9UNI6 340 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 V9GYQ6 96 aa10.05□□□□□ -0.8
PTPRM-203ENST00000400060 UBA6A0AVT1 1052 aaPredicted RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 H3BMM5 538 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 K7ERI5 159 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ZSCAN5DPP0CG00 497 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 MAPK1P28482 360 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 DUOXA2Q1HG44 320 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF598Q86UK7 904 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 LACC1Q8IV20 430 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 SLC45A3Q96JT2 553 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 DMRTB1Q96MA1 342 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 THUMPD3Q9BV44 507 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 KCNN3Q9UGI6 736 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 MAGED2Q9UNF1 606 aaPredicted RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 LMO7Q8WWI1 1683 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 CAPN14A8MX76 684 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 RASAL1O95294 804 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 TGM6O95932 706 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 PIM1P11309 404 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms