RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 ZDHHC6Q9H6R6 413 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 CACNA2D2Q9NY47 1150 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 DPP7Q9UHL4 492 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 HCN2Q9UL51 889 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 TCRBV9S1A1TA0A576 114 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 PENKP01210 267 aaPredicted RBP11.82□□□□□ -0.52
SKA3-203ENST00000400018 FOSL2P15408 326 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 MCM3P25205 808 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 DGKGP49619 791 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 KDELC1Q6UW63 502 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 DPY19L3Q6ZPD9 716 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 OR13C4Q8NGS5 318 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 ZNF669Q96BR6 464 aaPredicted RBP11.82□□□□□ -0.52
SKA3-203ENST00000400018 RMDN1Q96DB5 314 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 CCDC97Q96F63 343 aaPredicted RBP11.82□□□□□ -0.52
SKA3-203ENST00000400018 IMP4Q96G21 291 aaKnown RBP11.82□□□□□ -0.52
SKA3-203ENST00000400018 GJA4P35212 333 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 YBEYP58557 167 aaPredicted RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 TUBB4BP68371 445 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 C2orf27AQ580R0 203 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 TMEM31Q5JXX7 168 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 TIGD7Q6NT04 549 aaPredicted RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 HOMEZQ8IX15 550 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 PPM1NQ8N819 430 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 NSMCE1Q8WV22 266 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 VOPP1Q96AW1 172 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 CDCA3Q99618 268 aaPredicted RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 DZANK1Q9NVP4 752 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 RPS6KL1Q9Y6S9 549 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 A0A1W2PPM1 405 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 TBC1D3BA6NDS4 549 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 ALOX15BO15296 676 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 PRLP01236 227 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 ARSDP51689 593 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 TMED2Q15363 201 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 CNGA3Q16281 694 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 TMEM184AQ6ZMB5 413 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 YAF2Q8IY57 180 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 CPXM2Q8N436 756 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 EZH1Q92800 747 aaPredicted RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 FCRL5Q96RD9 977 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 DDX50Q9BQ39 737 aaKnown RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 POLR1EQ9GZS1 481 aaKnown RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 FAM96AQ9H5X1 160 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 KIAA1522Q9P206 1035 aaPredicted RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 NOVA2Q9UNW9 492 aaKnown RBP11.81□□□□□ -0.52
SKA3-203ENST00000400018 TTC28Q96AY4 2481 aa11.81□□□□□ -0.52
SKA3-203ENST00000400018 UGT2B4P06133 528 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 PSMC3P17980 439 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SAT1P21673 171 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 DDX6P26196 483 aaKnown RBP eCLIP11.8□□□□□ -0.52
SKA3-203ENST00000400018 HNRNPH1P31943 449 aaKnown RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 FDFT1P37268 417 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CDKN1CP49918 316 aaPredicted RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 PTPRNQ16849 979 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 FBXW10Q5XX13 1052 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 TSPAN33Q86UF1 283 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 MDM1Q8TC05 714 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 FUBP1Q96AE4 644 aaKnown RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 MYO19Q96H55 970 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SLC25A51Q9H1U9 297 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 UBE2ZQ9H832 354 aaPredicted RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 BRD9Q9H8M2 597 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 ITM2BQ9Y287 266 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 RAI2Q9Y5P3 530 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CISD3P0C7P0 127 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CA5AP35218 305 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 OPRD1P41143 372 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 LIG3P49916 1009 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SERPINH1P50454 418 aaKnown RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 RUNX3Q13761 415 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 HSP90AA5PQ58FG0 334 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 ZNF789Q5FWF6 425 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 DENND6AQ8IWF6 608 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 TEX26Q8N6G2 289 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 FLCNQ8NFG4 579 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CCHCR1Q8TD31 782 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 STAMBPL1Q96FJ0 436 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 FERMT1Q9BQL6 677 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 GGT7Q9UJ14 662 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CD207Q9UJ71 328 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 TRHDEQ9UKU6 1024 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SARDHQ9UL12 918 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 EXOC1LA0A1B0GW35 172 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 RNF40O75150 1001 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CTSLP07711 333 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 ATXN1LP0C7T5 689 aaKnown RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 ADRA1AP35348 466 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 ZNF135P52742 658 aaPredicted RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 ECT2LQ008S8 904 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CTBP1Q13363 440 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SLC1A5Q15758 541 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 ITPRIPL1Q6GPH6 555 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 PCGF5Q86SE9 256 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CCDC117Q8IWD4 279 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms