RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 HSPA1AP0DMV8 641 aaKnown RBP25.83■■□□□ 1.72
COL13A1-203ENST00000398969 HSPA1BP0DMV9 641 aaKnown RBP25.83■■□□□ 1.72
COL13A1-203ENST00000398969 HOXC8P31273 242 aa25.83■■□□□ 1.72
COL13A1-203ENST00000398969 ADRA1AP35348 466 aa25.83■■□□□ 1.72
COL13A1-203ENST00000398969 ATXN3P54252 364 aaPredicted RBP25.83■■□□□ 1.72
COL13A1-203ENST00000398969 TRIM67Q6ZTA4 783 aa25.83■■□□□ 1.72
COL13A1-203ENST00000398969 C2CD4AQ8NCU7 369 aaPredicted RBP25.83■■□□□ 1.72
COL13A1-203ENST00000398969 PTCD2Q8WV60 388 aaKnown RBP25.83■■□□□ 1.72
COL13A1-203ENST00000398969 MYLPFQ96A32 169 aa25.83■■□□□ 1.72
COL13A1-203ENST00000398969 PKP2Q99959 881 aa25.83■■□□□ 1.72
COL13A1-203ENST00000398969 A0A087X1B8 175 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 MAFKO60675 156 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 CD151P48509 253 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 DNAJB13P59910 316 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 ZNF470Q6ECI4 717 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 CNSTQ6PJW8 725 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 PELI3Q8N2H9 469 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 CEP70Q8NHQ1 597 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 GAD1Q99259 594 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 MRM3Q9HC36 420 aaKnown RBP25.82■■□□□ 1.72
COL13A1-203ENST00000398969 TREX1Q9NSU2 369 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 CLIC5Q9NZA1 410 aa25.82■■□□□ 1.72
COL13A1-203ENST00000398969 OR6B1O95007 311 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 CAPNS1P04632 268 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 GEMP55040 296 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 GTSE1Q9NYZ3 720 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 NDUFA13Q9P0J0 144 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 PCDHGB4Q9UN71 923 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 PCDHGB5Q9Y5G0 923 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 HNRNPLP14866 589 aaKnown RBP eCLIP25.81■■□□□ 1.72
COL13A1-203ENST00000398969 ATP5F1P24539 256 aaPredicted RBP25.81■■□□□ 1.72
COL13A1-203ENST00000398969 CYP2C18P33260 490 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 FCGRTP55899 365 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 LSAMPQ13449 338 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 GK5Q6ZS86 529 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 TRPV6Q9H1D0 765 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 MIOSQ9NXC5 875 aa25.81■■□□□ 1.72
COL13A1-203ENST00000398969 NEMP2A6NFY4 417 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 MATN3O15232 486 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 IGLV3-25P01717 112 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 THP07101 528 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 CYBAP13498 195 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 KPNA2P52292 529 aaKnown RBP25.8■■□□□ 1.72
COL13A1-203ENST00000398969 SULT2A1Q06520 285 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 PTK2BQ14289 1009 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 FAM156AQ8NDB6 213 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 TRIB2Q92519 343 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 PRICKLE1Q96MT3 831 aaPredicted RBP25.8■■□□□ 1.72
COL13A1-203ENST00000398969 RTP3Q9BQQ7 232 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 SLC39A8Q9C0K1 460 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 ENTPD7Q9NQZ7 604 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 IGSF5Q9NSI5 407 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 ARHGEF38Q9NXL2 777 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.8■■□□□ 1.72
COL13A1-203ENST00000398969 FBXO5Q9UKT4 447 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 GABRQQ9UN88 632 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 TRIM38O00635 465 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 PMPCBO75439 489 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 PAMP19021 973 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 PCSK1P29120 753 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 POU4F1Q01851 419 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 KIAA0930Q6ICG6 404 aaPredicted RBP25.8■■□□□ 1.72
COL13A1-203ENST00000398969 ZNF280DQ6N043 979 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 UTP6Q9NYH9 597 aaKnown RBP25.8■■□□□ 1.72
COL13A1-203ENST00000398969 BPTFQ12830 3046 aa25.8■■□□□ 1.72
COL13A1-203ENST00000398969 KCNU1A8MYU2 1149 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 AURKAO14965 403 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 HLA-DQB2P05538 268 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 CPB1P15086 417 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 TCN1P20061 433 aaPredicted RBP25.79■■□□□ 1.72
COL13A1-203ENST00000398969 CHRNA4P43681 627 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 SLC12A2P55011 1212 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 EIF4EBP2Q13542 120 aaPredicted RBP25.79■■□□□ 1.72
COL13A1-203ENST00000398969 GNASQ5JWF2 1037 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 SPATA24Q86W54 205 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 FSD1LQ9BXM9 530 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 MRPL1Q9BYD6 325 aaKnown RBP25.79■■□□□ 1.72
COL13A1-203ENST00000398969 BDNFP23560 247 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 MFSD14CQ5VZR4 134 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 CHSY3Q70JA7 882 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 TMEM102Q8N9M5 508 aaPredicted RBP25.79■■□□□ 1.72
COL13A1-203ENST00000398969 SPPL2BQ8TCT7 592 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 CNBD2Q96M20 576 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 CHST12Q9NRB3 414 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 LZTS1Q9Y250 596 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 FIS1Q9Y3D6 152 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 PCDHGA7Q9Y5G6 932 aa25.79■■□□□ 1.72
COL13A1-203ENST00000398969 KPNA6O60684 536 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 TFAP2AP05549 437 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 HOXC13P31276 330 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 RPL5P46777 297 aaKnown RBP25.78■■□□□ 1.72
COL13A1-203ENST00000398969 FLT3LGP49771 235 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 CSHL1Q14406 222 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 TIGD5Q53EQ6 642 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 TECRLQ5HYJ1 363 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 RBM20Q5T481 1227 aaKnown RBP25.78■■□□□ 1.72
COL13A1-203ENST00000398969 ISLR2Q6UXK2 745 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 HMGCLL1Q8TB92 370 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 LPPQ93052 612 aa25.78■■□□□ 1.72
COL13A1-203ENST00000398969 MRGPRX2Q96LB1 330 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms