RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PTCD2Q8WV60 388 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 VOPP1Q96AW1 172 aa19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 RPL10LQ96L21 214 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 CCDC77Q9BR77 488 aa19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 TRMT61BQ9BVS5 477 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 TDRD1Q9BXT4 1180 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 PPCSQ9HAB8 311 aa19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 MRM3Q9HC36 420 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 EURLQ9NYK6 297 aa19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 SCN8AQ9UQD0 1980 aa19.68■□□□□ 0.74
PDLIM2-205ENST00000397761 MBTPS2O43462 519 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 NDST3O95803 873 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 GSRP00390 522 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 PRLP01236 227 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 SRPRAP08240 638 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 PRKCHP24723 683 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 GDI1P31150 447 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 GJA4P35212 333 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 OPRD1P41143 372 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 SIRPB2Q5JXA9 342 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 ATXN7L2Q5T6C5 722 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 PCDH20Q8N6Y1 951 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 OR2AP1Q8NGE2 309 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 CHFRQ96EP1 664 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 CFAP36Q96G28 342 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 RANBP9Q96S59 729 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 TRIM56Q9BRZ2 755 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 TMBIM4Q9HC24 238 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 MOCS1Q9NZB8 636 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 SAMD15Q9P1V8 674 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 DEC1Q9P2X7 70 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 PRKAG3Q9UGI9 489 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 NUMBLQ9Y6R0 609 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 H3BQF6 201 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 USP1O94782 785 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 IGSF6O95976 241 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 IVLP07476 585 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 TPH1P17752 444 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 STX2P32856 288 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 SLC6A11P48066 632 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 MESP2Q0VG99 397 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 CRYMQ14894 314 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 EIF4HQ15056 248 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 RASA2Q15283 850 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 PTPRNQ16849 979 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 ITPRIPL2Q3MIP1 535 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 PCID2Q5JVF3 399 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 GRAMD4Q6IC98 578 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 CASC4Q6P4E1 433 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 ZNF449Q6P9G9 518 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 CAPN12Q6ZSI9 719 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 TDRPQ86YL5 185 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 MAFAQ8NHW3 353 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 FBF1Q8TES7 1133 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 IFT43Q96FT9 208 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 MYO19Q96H55 970 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 GTSE1Q9NYZ3 720 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 SLCO3A1Q9UIG8 710 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 RAI2Q9Y5P3 530 aa19.67■□□□□ 0.74
PDLIM2-205ENST00000397761 CKAP5Q14008 2032 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 RASGRF2O14827 1237 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 TIMM44O43615 452 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 FZD6O60353 706 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 ATP5BP06576 529 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 POLBP06746 335 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 DLDP09622 509 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 MYZAPP0CAP1 466 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 ALADP13716 330 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 KCNA5P22460 613 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 GCAP28676 217 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 SNRPD1P62314 119 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 TRAF2Q12933 501 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 KRT71Q3SY84 523 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 SPANXN3Q5MJ09 141 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 RNF135Q8IUD6 432 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 KDM1BQ8NB78 822 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 EPS8L3Q8TE67 593 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 PGM2Q96G03 612 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 CYTH2Q99418 400 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 DHRS4Q9BTZ2 278 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 TM6SF2Q9BZW4 377 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 FAM169AQ9Y6X4 670 aa19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 ZNF106Q9H2Y7 1883 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-205ENST00000397761 PRUNE2Q8WUY3 3088 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 ZCWPW2A0A1B0GU75 182 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 EXOC1LA0A1B0GW35 172 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 PRRT4C9JH25 899 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 HTRA2O43464 458 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 SOCS5O75159 536 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 CA4P22748 312 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 ADRA1DP25100 572 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 DLG2Q15700 870 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 LONRF1Q17RB8 773 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 KLHL38Q2WGJ6 581 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 ANKRD20A4Q4UJ75 823 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 HSP90B2PQ58FF3 399 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 TNFAIP8L3Q5GJ75 292 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 PKN3Q6P5Z2 889 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 KDELC2Q7Z4H8 507 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms