RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ZNF24P17028 368 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 SFPQP23246 707 aaKnown RBP eCLIP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 GUCY1A2P33402 732 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 EPS15P42566 896 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 VPS41P49754 854 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 RTP1P59025 263 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 CTAG1AP78358 180 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 CBX1P83916 185 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 GCNT1Q02742 428 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 GRIN1Q05586 938 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 CD69Q07108 199 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 GOLGA8DPQ0D2H9 430 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 RAPSNQ13702 412 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 DOC2AQ14183 400 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 TCTE1Q5JU00 501 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF787Q6DD87 383 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 GRAMD4Q6IC98 578 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 DPY19L2P1Q6NXN4 242 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 OGFOD3Q6PK18 319 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 TRABD2AQ86V40 505 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 SGMS1Q86VZ5 419 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 NUDT13Q86X67 352 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 P3H2Q8IVL5 708 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 DHX40Q8IX18 779 aaKnown RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 KLHL7Q8IXQ5 586 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 DBF4BQ8NFT6 615 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 FBXO18Q8NFZ0 1043 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 GRAPLQ8TC17 118 aaPredicted RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 KAT2AQ92830 837 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 FBXL20Q96IG2 436 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 FAM227BQ96M60 508 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 KLHL15Q96M94 604 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 PARK7Q99497 189 aaKnown RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC77Q9BR77 488 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 NUP85Q9BW27 656 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 YIPF2Q9BWQ6 316 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 AMNQ9BXJ7 453 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 LRRCC1Q9C099 1032 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 SUGCTQ9HAC7 445 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 TMLHEQ9NVH6 421 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 XPR1Q9UBH6 696 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 IPO11Q9UI26 975 aaKnown RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 MAD2L2Q9UI95 211 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 RWDD3Q9Y3V2 267 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC144AA2RUR9 1427 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 TNS3Q68CZ2 1445 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 HTR3EA5X5Y0 456 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 KDM4EB2RXH2 506 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 ZSCAN9O15535 394 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 ADCY6O43306 1168 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 AK1P00568 194 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 CHN1P15882 459 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 PNPLA4P41247 253 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 RGS19P49795 217 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 GFPT1Q06210 699 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 ABHD18Q0P651 414 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 DPYSQ14117 519 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 GALNT3Q14435 633 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 SGCBQ16585 318 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 C15orf39Q6ZRI6 1047 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 CEP128Q6ZU80 1094 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 AMZ2Q86W34 360 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 DDIASQ8IXT1 998 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 MMP21Q8N119 569 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 CARFQ8N187 725 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 PSMA8Q8TAA3 256 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 SMARCC2Q8TAQ2 1214 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 SLC2A12Q8TD20 617 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF775Q96BV0 537 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 PTERQ96BW5 349 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 PRR11Q96HE9 360 aaPredicted RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 SH3GL3Q99963 347 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 RIBC2Q9H4K1 309 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 DNAJC11Q9NVH1 559 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 ARHGEF38Q9NXL2 777 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 ANKMY1Q9P2S6 941 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 CLEC4AQ9UMR7 237 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 RUVBL1Q9Y265 456 aaKnown RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 TDRKHQ9Y2W6 561 aaKnown RBP6.89□□□□□ -1.31
SMCO1-201ENST00000397537 STARD13Q9Y3M8 1113 aa6.89□□□□□ -1.31
SMCO1-201ENST00000397537 LOC102723996A0A087X1L8 192 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 MEGF11A6BM72 1044 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 OOEPA6NGQ2 149 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PRR33A8MZF0 331 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 E9PBE3 544 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 CCNT2O60583 730 aaKnown RBP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PRAMEF4O60810 478 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PAGE4O60829 102 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 TIAF1O95411 115 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 IL1AP01583 271 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 GBAP04062 536 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 GNAI3P08754 354 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 TNFRSF1AP19438 455 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ALDH4A1P30038 563 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 GATA4P43694 442 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 HAND2P61296 217 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 GNAI1P63096 354 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms