RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SFT2D3Q587I9 215 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 VARS2Q5ST30 1063 aaKnown RBP24■■□□□ 1.43
PABPN1-202ENST00000397276 POTEHQ6S545 545 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 COLGALT2Q8IYK4 626 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 DCP1BQ8IZD4 617 aaKnown RBP24■■□□□ 1.43
PABPN1-202ENST00000397276 CCNYL1Q8N7R7 359 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 PCSK9Q8NBP7 692 aaKnown RBP24■■□□□ 1.43
PABPN1-202ENST00000397276 NUF2Q9BZD4 464 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 FAM192AQ9GZU8 254 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 FAM96AQ9H5X1 160 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 DNAJB2P25686 324 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 SERPINB5P36952 375 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 ACLYP53396 1101 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 TAS2R39P59534 338 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 RAB10P61026 200 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 MS4A13Q5J8X5 152 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 LIPMQ5VYY2 423 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 CNSTQ6PJW8 725 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 ZYG11AQ6WRX3 759 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 FRMD7Q6ZUT3 714 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 PSMG2Q969U7 264 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 C1orf21Q9H246 121 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 ZDHHC2Q9UIJ5 367 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 EML3Q32P44 896 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 RAP1GAP2Q684P5 730 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 LRRC8EQ6NSJ5 796 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 KLHDC8BQ8IXV7 354 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 SCML2Q9UQR0 700 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 TLR6Q9Y2C9 796 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 NLRC5Q86WI3 1866 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 DSC2Q02487 901 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 DSC1Q08554 894 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 UGP2Q16851 508 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 CTXN3Q4LDR2 81 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 FAM171A1Q5VUB5 890 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 TMC7Q7Z402 723 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 ARHGAP22Q7Z5H3 698 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 TCF7L2Q9NQB0 619 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 HCSTQ9UBK5 93 aa23.99■■□□□ 1.43
PABPN1-202ENST00000397276 TMEM114B3SHH9 223 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 GJB3O75712 270 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 OAZ2O95190 189 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 RBM20Q5T481 1227 aaKnown RBP23.98■■□□□ 1.43
PABPN1-202ENST00000397276 LDB1Q86U70 411 aaPredicted RBP23.98■■□□□ 1.43
PABPN1-202ENST00000397276 FBXO5Q9UKT4 447 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 ANKRD6Q9Y2G4 727 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 DLX3O60479 287 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 HADHAP40939 763 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 AFMIDQ63HM1 303 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 NEPROQ6NW34 567 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 IGSF8Q969P0 613 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 CMTM5Q96DZ9 223 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 SLC39A13Q96H72 371 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 PACSIN3Q9UKS6 424 aa23.98■■□□□ 1.43
PABPN1-202ENST00000397276 OR6B1O95007 311 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 PEX11BO96011 259 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 CSRP3P50461 194 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 IHHQ14623 411 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 FAM26DQ5JW98 314 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 MARC1Q5VT66 337 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 PTAR1Q7Z6K3 402 aaPredicted RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 RNF180Q86T96 592 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 DEFB107AQ8IZN7 70 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 ZYG11BQ9C0D3 744 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 DRC3Q9H069 523 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 SP110Q9HB58 689 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 TREX1Q9NSU2 369 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 ADAMTS6Q9UKP5 1117 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 NEMP2A6NFY4 417 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 JUNP05412 331 aaKnown RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 PAMP19021 973 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 TFEBP19484 476 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 PBX3P40426 434 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 TM4SF4P48230 202 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 GATMP50440 423 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 RPL14P50914 215 aaKnown RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 NKX3-2P78367 333 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 TBC1D25Q3MII6 688 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 NXNQ6DKJ4 435 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 CNTN4Q8IWV2 1026 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 STYXQ8WUJ0 223 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 FBXO32Q969P5 355 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 LENG8Q96PV6 779 aaPredicted RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 FIS1Q9Y3D6 152 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 PCDHB5Q9Y5E4 795 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 NYNRINQ9P2P1 1898 aaKnown RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 CABYRO75952 493 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 HTR7P34969 479 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 CD151P48509 253 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 SLC12A2P55011 1212 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 MSLNQ13421 630 aaPredicted RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 CSHL1Q14406 222 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 NFE2Q16621 373 aaPredicted RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 C10orf120Q5SQS8 335 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 MARK4Q96L34 752 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 SEPT5Q99719 369 aaPredicted RBP23.97■■□□□ 1.43
PABPN1-202ENST00000397276 FBXO44Q9H4M3 255 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 RAP2CQ9Y3L5 183 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 PTPRDP23468 1912 aa23.97■■□□□ 1.43
PABPN1-202ENST00000397276 NT5C1B-RDH14C9J2C7 533 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms