RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 IGLON5A6NGN9 336 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 FIGNL2A6NMB9 653 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 C16orf96A6NNT2 1141 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 TTLL8A6PVC2 850 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 LMO7DNF2Z398 122 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 I6L893 689 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 BIN1O00499 593 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 RAD51BO15315 384 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 SRGAP2O75044 1071 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 TFE3P19532 575 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ETFBP38117 255 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 SULT1E1P49888 294 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 GEMIN4P57678 1058 aaKnown RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PFN3P60673 137 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 YPEL5P62699 121 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PDE1CQ14123 709 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PTK2BQ14289 1009 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 NR0B2Q15466 257 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 CDKN3Q16667 212 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 DEFB133Q30KQ1 61 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PTPN20Q4JDL3 420 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ARTNQ5T4W7 220 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 OTUD1Q5VV17 481 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 GUSBP11Q6P575 273 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 XKR5Q6UX68 686 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 RBM44Q6ZP01 1051 aaKnown RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ARCQ7LC44 396 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 EFL1Q7Z2Z2 1120 aaKnown RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 SLC47A2Q86VL8 602 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 CREBRFQ8IUR6 639 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 FAM71AQ8IYT1 594 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 OR7D4Q8NG98 312 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 WDR36Q8NI36 951 aaKnown RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 LMX1AQ8TE12 382 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 TTC9Q92623 222 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 NAT6Q93015 286 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ARHGEF26Q96DR7 871 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 MED8Q96G25 268 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ATXN7L3BQ96GX2 97 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PRR11Q96HE9 360 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 INSM2Q96T92 566 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 TBCBQ99426 244 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ZYG11BQ9C0D3 744 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PDCL3Q9H2J4 239 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 CAAP1Q9H8G2 361 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ATP13A1Q9HD20 1204 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PPARGC1AQ9UBK2 798 aaKnown RBP8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ZNF212Q9UDV6 495 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 KLF15Q9UIH9 416 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 RWDD2AQ9UIY3 292 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 DNAJC12Q9UKB3 198 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 SATB2Q9UPW6 733 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 PCDHB11Q9Y5F2 797 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 ENTPD2Q9Y5L3 495 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 SNX10Q9Y5X0 201 aa8.9□□□□□ -0.98
CAPN3-208ENST00000397204 TRPM6Q9BX84 2022 aa8.9□□□□□ -0.99
CAPN3-208ENST00000397204 COL12A1Q99715 3063 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 TDRD6O60522 2096 aaKnown RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 A0A1W2PNU3 283 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CDRT15L2A8MXV6 281 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 K7ENP7 123 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 NEMP1O14524 444 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 TOR1BO14657 336 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 POP4O95707 220 aaKnown RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 ANXA6P08133 673 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CDH5P33151 784 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CCNHP51946 323 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 THOP1P52888 689 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 APBA1Q02410 837 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 GNA12Q03113 381 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 EIF2B5Q13144 721 aaKnown RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 MYLK3Q32MK0 819 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 ZNF805Q5CZA5 627 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 C3orf38Q5JPI3 329 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 INO80CQ6PI98 192 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CCDC81Q6ZN84 652 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 PARS2Q7L3T8 475 aaKnown RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 BNIPLQ7Z465 357 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CLEC14AQ86T13 490 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CENPTQ96BT3 561 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 BOCQ9BWV1 1114 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 HPCAL4Q9UM19 191 aa8.89□□□□□ -0.99
CAPN3-208ENST00000397204 CCDC187A0A096LP49 1063 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 TMX2-CTNND1H3BSU7 103 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 AREL1O15033 823 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 YY2O15391 372 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 GCATO75600 419 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 TNFSF15O95150 251 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 CD160O95971 181 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 GSRP00390 522 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 ITGA2BP08514 1039 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SCTRP47872 440 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 BLKP51451 505 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 SNRPD1P62314 119 aaKnown RBP8.88□□□□□ -0.99
CAPN3-208ENST00000397204 ARF5P84085 180 aa8.88□□□□□ -0.99
CAPN3-208ENST00000397204 NRG1Q02297 640 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms