RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TFE3P19532 575 aaPredicted RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 GKP32189 559 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 ETV5P41161 510 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 SULT1E1P49888 294 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 PEX5P50542 639 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 SNX16P57768 344 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 CYP4F2P78329 520 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 GNA12Q03113 381 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 ZFP36L1Q07352 338 aaKnown RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 ARTNQ5T4W7 220 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 GKN2Q86XP6 184 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 CCNJLQ8IV13 435 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 PASD1Q8IV76 773 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 RYBPQ8N488 228 aaPredicted RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 TP53I13Q8NBR0 393 aaPredicted RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 OR6K2Q8NGY2 324 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 ZNF564Q8TBZ8 553 aaPredicted RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 USP7Q93009 1102 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 NT5C3BQ969T7 300 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 DHTKD1Q96HY7 919 aaPredicted RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 EPAS1Q99814 870 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 OSBPL1AQ9BXW6 950 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 MBNL1Q9NR56 388 aaKnown RBP15.17■□□□□ 0.02
SEC13-206ENST00000397102 TMEM51Q9NW97 253 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEC13-206ENST00000397102 FOXJ2Q9P0K8 574 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 ACTL7AQ9Y615 435 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 LRRK1Q38SD2 2015 aa15.17■□□□□ 0.02
SEC13-206ENST00000397102 TMEM110-MUSTN1A8MSY1 372 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 BECN2A8MW95 431 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.16■□□□□ 0.02
SEC13-206ENST00000397102 MMP20O60882 483 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 RASGRP1O95267 797 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 UGT2B4P06133 528 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 CR2P20023 1033 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 ALG11Q2TAA5 492 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 HID1Q8IV36 788 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 TRIM59Q8IWR1 403 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 C1orf131Q8NDD1 294 aaKnown RBP15.16■□□□□ 0.02
SEC13-206ENST00000397102 GPR156Q8NFN8 814 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 OR2AP1Q8NGE2 309 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 CXorf40AQ8TE69 158 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 FAM81BQ96LP2 452 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 CMKLR1Q99788 373 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 ZYG11BQ9C0D3 744 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 B3GNT4Q9C0J1 378 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 EPN3Q9H201 632 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 TMPRSS4Q9NRS4 437 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 APPL1Q9UKG1 709 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 FLNCQ14315 2725 aa15.16■□□□□ 0.02
SEC13-206ENST00000397102 CLEC18AA5D8T8 446 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 C9orf172C9J069 976 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 KRIT1O00522 736 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 SRGAP2O75044 1071 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 GSRP00390 522 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 USP8P40818 1118 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 PPP1R2P41236 205 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 MAPK10P53779 464 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 GEMIN4P57678 1058 aaKnown RBP15.15■□□□□ 0.02
SEC13-206ENST00000397102 SNRPD1P62314 119 aaKnown RBP15.15■□□□□ 0.02
SEC13-206ENST00000397102 POLD3Q15054 466 aaPredicted RBP15.15■□□□□ 0.02
SEC13-206ENST00000397102 IRF4Q15306 451 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 KLHL40Q2TBA0 621 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 PTPN20Q4JDL3 420 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 TTI2Q6NXR4 508 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 FOXR2Q6PJQ5 311 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 CLEC18BQ6UXF7 455 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 TTC7BQ86TV6 843 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 FMR1NBQ8N0W7 255 aaPredicted RBP15.15■□□□□ 0.02
SEC13-206ENST00000397102 CLEC18CQ8NCF0 446 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 TSACCQ96A04 125 aaPredicted RBP15.15■□□□□ 0.02
SEC13-206ENST00000397102 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 KLHL32Q96NJ5 620 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 SYNCQ9H7C4 482 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.15■□□□□ 0.02
SEC13-206ENST00000397102 SDK2Q58EX2 2172 aa15.15■□□□□ 0.02
SEC13-206ENST00000397102 ZFC3H1O60293 1989 aaKnown RBP15.15■□□□□ 0.02
SEC13-206ENST00000397102 POP4O95707 220 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 CD44P16070 742 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 PNLIPP16233 465 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 GLB1P16278 677 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 HTR1BP28222 390 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 ETFBP38117 255 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 MARSP56192 900 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 RNASE9P60153 205 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 FOXK1P85037 733 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 NFATC4Q14934 902 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 TCEA2Q15560 299 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 LRRC73Q5JTD7 316 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 BORAQ6PGQ7 559 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 PTRH1Q86Y79 214 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 SLITRK4Q8IW52 837 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 DRC7Q8IY82 874 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 Q8N9G6 341 aaPredicted RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 ARHGEF2Q92974 986 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 HAPLN3Q96S86 360 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 TBCBQ99426 244 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms