RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 KLHL11Q9NVR0 708 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 SLC12A6Q9UHW9 1150 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 JRKLQ9Y4A0 524 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 SPTA1P02549 2419 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 GOLGA6L7A0A1B0GV03 622 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 CTAGE9A4FU28 777 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 MIF4GDA9UHW6 222 aaKnown RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 OPA1O60313 960 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 LRCH4O75427 683 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 LUC7L3O95232 432 aaKnown RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 MOCS2O96007 188 aaPredicted RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 IL1BP01584 269 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 APOEP02649 317 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 KRT7P08729 469 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 CCR1P32246 355 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 PCK1P35558 622 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 NNMTP40261 264 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 HDAC4P56524 1084 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 DAB2P98082 770 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 SULT2A1Q06520 285 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 SETMARQ53H47 684 aaPredicted RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 RAB6CQ53S08 254 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 FSCBQ5H9T9 825 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 MS4A13Q5J8X5 152 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 MEI1Q5TIA1 1274 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 RNF219Q5W0B1 726 aaPredicted RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 SLFN11Q7Z7L1 901 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 STK40Q8N2I9 435 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 TMEM145Q8NBT3 493 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 CENPIQ92674 756 aaPredicted RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
SEC13-205ENST00000397101 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 WDR24Q96S15 920 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 RAB6CQ9H0N0 254 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 PIGVQ9NUD9 493 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 TMEM51Q9NW97 253 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 STIM2Q9P246 746 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 SLCO3A1Q9UIG8 710 aa13.92□□□□□ -0.18
SEC13-205ENST00000397101 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 K7ENP7 123 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 ZNF500O60304 480 aaPredicted RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 MPOP05164 745 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 SLC2A3P11169 496 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 DGKAP23743 735 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 CTSOP43234 321 aaPredicted RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 TAS2R40P59535 323 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 KRT81Q14533 505 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 SMTNL2Q2TAL5 461 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 BOLA3Q53S33 107 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 ZC3H12AQ5D1E8 599 aaKnown RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 ERMARDQ5T6L9 678 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 FAM46CQ5VWP2 391 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 INO80CQ6PI98 192 aaPredicted RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 DSG4Q86SJ6 1040 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 CARNMT1Q8N4J0 409 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 ATP6V0D2Q8N8Y2 350 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 NT5C3BQ969T7 300 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 KLHDC7BQ96G42 594 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 SLC39A13Q96H72 371 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 NAF1Q96HR8 494 aaKnown RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 FCRL2Q96LA5 508 aaPredicted RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 DUSP23Q9BVJ7 150 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 TKTL2Q9H0I9 626 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEC13-205ENST00000397101 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
SEC13-205ENST00000397101 TLR6Q9Y2C9 796 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 COL12A1Q99715 3063 aa13.91□□□□□ -0.18
SEC13-205ENST00000397101 ALOX15BO15296 676 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 KLK10O43240 276 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 PSTPIP1O43586 416 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 SDC3O75056 442 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 USP12O75317 370 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 ENDOD1O94919 500 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 KRT1P04264 644 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.18
SEC13-205ENST00000397101 GIMD1P0DJR0 217 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 ALPPL2P10696 532 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 TCF4P15884 667 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 CTNNA2P26232 953 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 CETN2P41208 172 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 CXCR3P49682 368 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 DUSP3P51452 185 aaPredicted RBP13.9□□□□□ -0.18
SEC13-205ENST00000397101 RWDD2BP57060 319 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 LY6DQ14210 128 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 BRMS1LQ5PSV4 323 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 AGBL4Q5VU57 503 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 OTUD1Q5VV17 481 aaPredicted RBP13.9□□□□□ -0.18
SEC13-205ENST00000397101 NEK5Q6P3R8 708 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 XKR5Q6UX68 686 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 CCDC50Q8IVM0 306 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 ARFGAP1Q8N6T3 406 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 FAM174AQ8TBP5 190 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 FRS2Q8WU20 508 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms