RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 VPS4AQ9UN37 437 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 CCDC166P0CW27 439 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF37AP17032 561 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 FASP25445 335 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 S100GP29377 79 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 CCNG2Q16589 344 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 LYPLAL1Q5VWZ2 237 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 ZPBP2Q6X784 338 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 RASSF6Q6ZTQ3 369 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 DHFR2Q86XF0 187 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 ZCCHC10Q8TBK6 192 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 VAV3Q9UKW4 847 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 PSMD11O00231 422 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 GLRA2P23416 452 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 PSEN1P49768 467 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 SRP54P61011 504 aaKnown RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 MCL1Q07820 350 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 UBASH3BQ8TF42 649 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 RMND5BQ96G75 393 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 MYO19Q96H55 970 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 VIPAS39Q9H9C1 493 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 MRTO4Q9UKD2 239 aaKnown RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 IL6P05231 212 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 TAS2R41P59536 307 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 GRB14Q14449 540 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 TERF2Q15554 542 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 STK32CQ86UX6 486 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 NXF3Q9H4D5 531 aaKnown RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 PTPRMP28827 1452 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 KHDRBS3O75525 346 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 NQO1P15559 274 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 SSTR1P30872 391 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 CORO1AP31146 461 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 DLG4P78352 724 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 DAW1Q8N136 415 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 FEM1CQ96JP0 617 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 GOLGA2P5Q9HBQ8 144 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 MRPS33Q9Y291 106 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 RPL38P63173 70 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 SLC39A8Q9C0K1 460 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 NRDE2Q9H7Z3 1164 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 NAALADL1Q9UQQ1 740 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 GIT1Q9Y2X7 761 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 CNTNAP1P78357 1384 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 EFCAB10A6NFE3 127 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 CCT8L1PA6NM43 557 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 MRASO14807 208 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 PEX11AO75192 247 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 MMP3P08254 477 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 CCZ1BP86790 482 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 CCZ1P86791 482 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 CDYL2Q8N8U2 506 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 C12orf29Q8N999 325 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 SPATA9Q9BWV2 254 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 NEK3P51956 506 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 P4HA3Q7Z4N8 544 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 MARK1Q9P0L2 795 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 HCN3Q9P1Z3 774 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 ADAM28Q9UKQ2 775 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 PLGP00747 810 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 TIE1P35590 1138 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 RXRGP48443 463 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 NDUFA9Q16795 377 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 VITQ6UXI7 678 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 RTL3Q8N8U3 475 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 GPER1Q99527 375 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 APOL4Q9BPW4 351 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 AARSD1Q9BTE6 412 aaKnown RBP17.55■□□□□ 0.4
MCF2L-208ENST00000397030 REEP1Q9H902 201 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 GMIPQ9P107 970 aa17.55■□□□□ 0.4
MCF2L-208ENST00000397030 BTBD19C9JJ37 291 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 ITPKAP23677 461 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 ESRP1Q6NXG1 681 aaKnown RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 KLHL5Q96PQ7 755 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 MRPL45Q9BRJ2 306 aaKnown RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 PCDH9Q9HC56 1237 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 FAM198AQ9UFP1 575 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF536O15090 1300 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 MAPK8P45983 427 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 FAM187BQ17R55 369 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 GALNT7Q86SF2 657 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 TSTD1Q8NFU3 115 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 UGT2B28Q9BY64 529 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 DNPEPQ9ULA0 475 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 MRPS7Q9Y2R9 242 aaKnown RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 TSC22D4Q9Y3Q8 395 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 LINGO4Q6UY18 593 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 NOA1Q8NC60 698 aaKnown RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 DLGAP2Q9P1A6 1054 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 A8MU76 341 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 UGT2B4P06133 528 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 ZCCHC18P0CG32 403 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 FCGR1AP12314 374 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 CYP4F3Q08477 520 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 GCNT7Q6ZNI0 430 aa17.54■□□□□ 0.4
MCF2L-208ENST00000397030 PSTKQ8IV42 348 aaKnown RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 PTGR2Q8N8N7 351 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-208ENST00000397030 NELL1Q92832 810 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms