RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 DSC3Q14574 896 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CES4AQ5XG92 561 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 KIAA0930Q6ICG6 404 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TMEM154Q6P9G4 183 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CNSTQ6PJW8 725 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 NAPRTQ6XQN6 538 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ACVR1CQ8NER5 493 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SORT1Q99523 831 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TBX10O75333 385 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 LTA4HP09960 611 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 KPNA1P52294 538 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 RAP1GDS1P52306 607 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 LBRQ14739 615 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 MS4A13Q5J8X5 152 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 FAM91A1Q658Y4 838 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 LDB1Q86U70 411 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 CFAP52Q8N1V2 620 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 KYQ8NBH2 561 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 DRC3Q9H069 523 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 WASF2Q9Y6W5 498 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 G3V2L1 256 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 GFAPP14136 432 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 MRPS35P82673 323 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 DSG1Q02413 1049 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 ELAVL2Q12926 359 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 BFSP2Q13515 415 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 KIF19Q2TAC6 998 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 TSTD2Q5T7W7 516 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 HEXDCQ8WVB3 486 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 SEPT8Q92599 483 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 EPS15L1Q9UBC2 864 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 PACSIN3Q9UKS6 424 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 NUP205Q92621 2012 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 PIRTP0C851 137 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 GNAZP19086 355 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 CCR10P46092 362 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 SCNN1BP51168 640 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 FRG1Q14331 258 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 ALFQ53S48 1182 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 METTL21CQ5VZV1 264 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 FBXL22Q6P050 247 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 EPGNQ6UW88 154 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 CCDC117Q8IWD4 279 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 PHTF2Q8N3S3 785 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 LRGUKQ96M69 825 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 LENG8Q96PV6 779 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 OR52B2Q96RD2 323 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 MRPL1Q9BYD6 325 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 C1orf21Q9H246 121 aa11.66□□□□□ -0.54
PDXDC1-202ENST00000396410 TCN1P20061 433 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 PIK3R1P27986 724 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 OXCT1P55809 520 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 GALNT3Q14435 633 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 TRIP10Q15642 601 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 PIWIL4Q7Z3Z4 852 aaKnown RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 JADE3Q92613 823 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 C1orf74Q96LT6 269 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 ZIC5Q96T25 663 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 MUC3BQ9H195 1237 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 EFCAB1Q9HAE3 211 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.65□□□□□ -0.542e-8■■■□□ 15.8
PDXDC1-202ENST00000396410 LRCH1Q9Y2L9 728 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC35E2BP0CK96 405 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 GCKP35557 465 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 PPARGP37231 505 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 HK2P52789 917 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 EML3Q32P44 896 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 LSM12Q3MHD2 195 aaKnown RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 BNC2Q6ZN30 1099 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 SPPL2BQ8TCT7 592 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 ALG9Q9H6U8 611 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 TYW5A2RUC4 315 aaKnown RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 RGSL1A5PLK6 1076 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 PGFP49763 221 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 USP46P62068 366 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 CLLU1OSQ5K130 101 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 KIAA0408Q6ZU52 694 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC22A9Q8IVM8 553 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 FAR2Q96K12 515 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 PANX3Q96QZ0 392 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 CDH22Q9UJ99 828 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 VWA7Q9Y334 891 aa11.65□□□□□ -0.54
PDXDC1-202ENST00000396410 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 NDUFS3O75489 264 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 OAZ2O95190 189 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 ATP5C1P36542 298 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 ACTR3P61158 418 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms