RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 DKK3Q9UBP4 350 aa21.54■■□□□ 1.04
FXN-202ENST00000396364 CDC23Q9UJX2 597 aa21.54■■□□□ 1.04
FXN-202ENST00000396364 AAR2Q9Y312 384 aaKnown RBP21.54■■□□□ 1.04
FXN-202ENST00000396364 CUL9Q8IWT3 2517 aa21.54■■□□□ 1.04
FXN-202ENST00000396364 ESPNB1AK53 854 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 RNASEH2AO75792 299 aaKnown RBP21.53■■□□□ 1.04
FXN-202ENST00000396364 CTSLP07711 333 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 CNR2P34972 360 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 NEK3P51956 506 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 DSC2Q02487 901 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 WHAMMP3Q1A5X7 153 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 CCDC70Q6NSX1 233 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 TSSK4Q6SA08 328 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 HDDC3Q8N4P3 179 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.53■■□□□ 1.04
FXN-202ENST00000396364 RAB7BQ96AH8 199 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 IMP4Q96G21 291 aaKnown RBP21.53■■□□□ 1.04
FXN-202ENST00000396364 KLHL32Q96NJ5 620 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 FCRL5Q96RD9 977 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 HDAC8Q9BY41 377 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 TPSD1Q9BZJ3 242 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 GBA3Q9H227 469 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 KCNH6Q9H252 994 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 ZSCAN32Q9NX65 697 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 USP36Q9P275 1121 aaKnown RBP21.53■■□□□ 1.04
FXN-202ENST00000396364 PAK5Q9P286 719 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 ARIH1Q9Y4X5 557 aaPredicted RBP21.53■■□□□ 1.04
FXN-202ENST00000396364 ANKRD36A6QL64 1941 aa21.53■■□□□ 1.04
FXN-202ENST00000396364 CACNA1IQ9P0X4 2223 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 ZNF500O60304 480 aaPredicted RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 NFKB1P19838 968 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 GKP32189 559 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 COILP38432 576 aaPredicted RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 CD86P42081 329 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 PXNP49023 591 aaPredicted RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 TPMTP51580 245 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 GEMP55040 296 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 PARP6Q2NL67 630 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 DNTTIP2Q5QJE6 756 aaKnown RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 ARMC12Q5T9G4 340 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 ZC3H14Q6PJT7 736 aaKnown RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 SLC36A4Q6YBV0 504 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 ERN2Q76MJ5 926 aaKnown RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 CAMK1DQ8IU85 385 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 MAML2Q8IZL2 1156 aaPredicted RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 CCDC110Q8TBZ0 833 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 PDCD6IPQ8WUM4 868 aaKnown RBP21.52■■□□□ 1.04
FXN-202ENST00000396364 ADGRE3Q9BY15 652 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 SLC6A17Q9H1V8 727 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 SGK2Q9HBY8 427 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 SMARCAL1Q9NZC9 954 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 FAM153AQ9UHL3 310 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 SARDHQ9UL12 918 aa21.52■■□□□ 1.04
FXN-202ENST00000396364 A0A1W2PP55 124 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 PSMD3O43242 534 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 PIGNO95427 931 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 IGLV3-19P01714 112 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 SP9P0CG40 484 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 TDGF1P13385 188 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 FNTBP49356 437 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 MPP3Q13368 585 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 MNS1Q8NEH6 495 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 ARRDC2Q8TBH0 407 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 CCHCR1Q8TD31 782 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 IFT43Q96FT9 208 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 ZNF419Q96HQ0 510 aaPredicted RBP21.51■■□□□ 1.03
FXN-202ENST00000396364 BTBD1Q9H0C5 482 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 PCDHGC4Q9Y5F7 938 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 PCDHGA2Q9Y5H1 932 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 RAI2Q9Y5P3 530 aa21.51■■□□□ 1.03
FXN-202ENST00000396364 C16orf96A6NNT2 1141 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 NDUFS2O75306 463 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 ECEL1O95672 775 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 CD6P30203 668 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 FDFT1P37268 417 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 KCNJ1P48048 391 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 EPHB1P54762 984 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 RPL26P61254 145 aaKnown RBP21.5■■□□□ 1.03
FXN-202ENST00000396364 NIPAL4Q0D2K0 466 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 POM121L1PQ3SYA9 428 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 ERAP2Q6P179 960 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.5■■□□□ 1.03
FXN-202ENST00000396364 TTC7BQ86TV6 843 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 RBM15Q96T37 977 aaKnown RBP eCLIP21.5■■□□□ 1.03
FXN-202ENST00000396364 FSD1LQ9BXM9 530 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 TDRD1Q9BXT4 1180 aaKnown RBP21.5■■□□□ 1.03
FXN-202ENST00000396364 KDM4CQ9H3R0 1056 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 CYP8B1Q9UNU6 501 aa21.5■■□□□ 1.03
FXN-202ENST00000396364 RPL26L1Q9UNX3 145 aaKnown RBP21.5■■□□□ 1.03
FXN-202ENST00000396364 TSPAN11A1L157 253 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 TTC24A2A3L6 582 aaPredicted RBP21.49■■□□□ 1.03
FXN-202ENST00000396364 LRRC72A6NJI9 287 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 E7EVH7 732 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 MAP3K13O43283 966 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 HTRA2O43464 458 aaPredicted RBP21.49■■□□□ 1.03
FXN-202ENST00000396364 CPP00450 1065 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 ADRB3P13945 408 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 CD68P34810 354 aaPredicted RBP21.49■■□□□ 1.03
FXN-202ENST00000396364 GDF10P55107 478 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 SKOR1P84550 965 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms