RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 FUT11Q495W5 492 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 IL23RQ5VWK5 629 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 PSTKQ8IV42 348 aaKnown RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 LILRA2Q8N149 483 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 LRRC43Q8N309 656 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 TTC39CQ8N584 583 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 ZNF419Q96HQ0 510 aaPredicted RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 ZNF512Q96ME7 567 aaPredicted RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 ZNF560Q96MR9 790 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 NPY6RQ99463 290 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CPNE1Q99829 537 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 AP5M1Q9H0R1 490 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 ZNF839A8K0R7 811 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 PPP6CO00743 305 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 AKAP10O43572 662 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CRTAMO95727 393 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CYBAP13498 195 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 PSMC3P17980 439 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CRABP2P29373 138 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 AXLP30530 894 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 MAGEA6P43360 314 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 BRCC3P46736 316 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 LIMK2P53671 638 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 MGAT3Q09327 533 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CAPRIN1Q14444 709 aaKnown RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 SV2CQ496J9 727 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 NADK2Q4G0N4 442 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 TIGD5Q53EQ6 642 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CNSTQ6PJW8 725 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 PIM3Q86V86 326 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 LRTOMTQ8WZ04 291 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 KLHL32Q96NJ5 620 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 FAM124BQ9H5Z6 455 aaPredicted RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 SOX17Q9H6I2 414 aaPredicted RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 TNFRSF12AQ9NP84 129 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 ZCWPW2A0A1B0GU75 182 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 FAM95CA0A1B0GW59 222 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 PDLIM1O00151 329 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 DLX3O60479 287 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 SUPT3HO75486 399 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 TIPRLO75663 272 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 B3GAT3O94766 335 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 CD52P31358 61 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 RGS2P41220 211 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 CHN2P52757 468 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 SNX16P57768 344 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 TAS2R39P59534 338 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 FOXD4Q12950 439 aaPredicted RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 RARS2Q5T160 578 aaKnown RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 ARTNQ5T4W7 220 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 KRT80Q6KB66 452 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 DDIASQ8IXT1 998 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 TRIML2Q8N7C3 387 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 TMIGD2Q96BF3 282 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 TNIP3Q96KP6 325 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 NOL11Q9H8H0 719 aaKnown RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 RNF186Q9NXI6 227 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 PCDHB12Q9Y5F1 795 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 PTPRDP23468 1912 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 HDAC3O15379 428 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 DAB1O75553 588 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 GABRB3P28472 473 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 PLOD1Q02809 727 aaPredicted RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 DPYSQ14117 519 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 CHST15Q7LFX5 561 aaPredicted RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 LRRTM3Q86VH5 581 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 MIB1Q86YT6 1006 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 ZDHHC17Q8IUH5 632 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 TOP6BLQ8N6T0 577 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 ACTRT2Q8TDY3 377 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 SH3RF2Q8TEC5 729 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 HSFY1Q96LI6 401 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 ANKRD27Q96NW4 1050 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 SLC2A13Q96QE2 648 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 FRMD8Q9BZ67 464 aaPredicted RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 ALG9Q9H6U8 611 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 ETAA1Q9NY74 926 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 BTRCQ9Y297 605 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 ACOT9Q9Y305 439 aa9.38□□□□□ -0.91
NDE1-201ENST00000396354 COPG1Q9Y678 874 aaKnown RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 COL4A4P53420 1690 aaPredicted RBP9.38□□□□□ -0.91
NDE1-201ENST00000396354 TDRD15B5MCY1 1934 aaKnown RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 H3BNX3 289 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 H3BSA7 217 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 ZNF195O14628 629 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PFDN1O60925 122 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 SIX3O95343 332 aaPredicted RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 TSHRP16473 764 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 CCND3P30281 292 aaPredicted RBP9.37□□□□□ -0.91
NDE1-201ENST00000396354 SCNN1BP51168 640 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 GRTP1Q5TC63 336 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 CPNE9Q8IYJ1 553 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 ATPAF2Q8N5M1 289 aa9.37□□□□□ -0.91
NDE1-201ENST00000396354 PAF1Q8N7H5 531 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms