RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LRIT1Q9P2V4 623 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 ERRFI1Q9UJM3 462 aaPredicted RBP13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 SMC3Q9UQE7 1217 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 MED13LQ71F56 2210 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 B4E171 279 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 ZMPSTE24O75844 475 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 SORBS2O94875 1100 aaKnown RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 RASGRP1O95267 797 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 TSPAN7P41732 249 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 SEPT6Q14141 434 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 TCEA2Q15560 299 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 CNGA2Q16280 664 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 SHC4Q6S5L8 630 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 LINGO4Q6UY18 593 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 TIPARPQ7Z3E1 657 aaKnown RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 PIM3Q86V86 326 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 ZNF683Q8IZ20 524 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 STARD8Q92502 1023 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 ART4Q93070 314 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 RPRD1AQ96P16 312 aaPredicted RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 HEPHQ9BQS7 1158 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 MIS12Q9H081 205 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 GPN2Q9H9Y4 310 aaPredicted RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 AKAP7Q9P0M2 348 aaPredicted RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 VANGL2Q9ULK5 521 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 COQ4Q9Y3A0 265 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 KCTD3Q9Y597 815 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 DGKBQ9Y6T7 804 aa13.86□□□□□ -0.19
VCPKMT-201ENST00000395859 A0A0D9SEW6 157 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 C16orf96A6NNT2 1141 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 TTLL8A6PVC2 850 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 CTSEP14091 401 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 MAP4P27816 1152 aaKnown RBP13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 LIMK2P53671 638 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 CDH4P55283 916 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 TRA2AQ13595 282 aaKnown RBP eCLIP13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 EIF2S3LQ2VIR3 472 aaKnown RBP13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 MAP9Q49MG5 647 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 CCDC74BQ96LY2 380 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 HAPLN3Q96S86 360 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 EFHD1Q9BUP0 239 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 ASPSCR1Q9BZE9 553 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 CEP44Q9C0F1 390 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 MUC3BQ9H195 1237 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 HS3ST4Q9Y661 456 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 POLEQ07864 2286 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 CHD5Q8TDI0 1954 aa13.85□□□□□ -0.19
VCPKMT-201ENST00000395859 SPG11Q96JI7 2443 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 TMEM110-MUSTN1A8MSY1 372 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 TCP11X1B4DZS4 312 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 MKRN2OSH3BPM6 223 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 RNF225M0QZC1 329 aaPredicted RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 SART1O43290 800 aaKnown RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 CD160O95971 181 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 PAEPP09466 180 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 THRAP10827 490 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 CD1CP29017 333 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 MXI1P50539 228 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 CCNHP51946 323 aaPredicted RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 SRP54P61011 504 aaKnown RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 MC1RQ01726 317 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 ABHD18Q0P651 414 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 SQSTM1Q13501 440 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 NFATC4Q14934 902 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 IRF4Q15306 451 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 EDRF1Q3B7T1 1238 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 ALFQ53S48 1182 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 CARD16Q5EG05 197 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 PLPP6Q8IY26 295 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 FAM186BQ8IYM0 893 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 UNC5BQ8IZJ1 945 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 NLGN4XQ8N0W4 816 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 SLC34A3Q8N130 599 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 NLGN4YQ8NFZ3 816 aaPredicted RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 FAM149B1Q96BN6 582 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 RTP4Q96DX8 246 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 CYP4F12Q9HCS2 524 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 OCIAD1Q9NX40 245 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 DKK3Q9UBP4 350 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 ZNF212Q9UDV6 495 aa13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 TMEM184BQ9Y519 407 aaPredicted RBP13.84□□□□□ -0.19
VCPKMT-201ENST00000395859 M0QYV0 167 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 ENDOD1O94919 500 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 F8A1P23610 371 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 NR2F2P24468 414 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 GPD2P43304 727 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 SERPINH1P50454 418 aaKnown RBP13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 OR1D5P58170 312 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 MRPL49Q13405 166 aaKnown RBP13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 ARHGEF7Q14155 803 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 ANKS6Q68DC2 871 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 SETD3Q86TU7 594 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms