RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 AUHQ13825 339 aaKnown RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ELAVL3Q14576 367 aaKnown RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 KRT31Q15323 416 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 CST6Q15828 149 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 C9orf64Q5T6V5 341 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 DCAF12L1Q5VU92 463 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 RAP1GAP2Q684P5 730 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 OR6B2Q6IFH4 312 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 FBXL22Q6P050 247 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF783Q6ZMS7 281 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 SETD3Q86TU7 594 aaPredicted RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 NOP9Q86U38 636 aaKnown RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ERICH1Q86X53 443 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 XYLT1Q86Y38 959 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 PASD1Q8IV76 773 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF683Q8IZ20 524 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 PHACTR4Q8IZ21 702 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 Q8N3U1 123 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 CARNMT1Q8N4J0 409 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 HDDC3Q8N4P3 179 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 GPT2Q8TD30 523 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 FRS2Q8WU20 508 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 PTPRN2Q92932 1015 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 SPAG5Q96R06 1193 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ERGIC2Q96RQ1 377 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 HAPLN3Q96S86 360 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ORAI3Q9BRQ5 295 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 SYNCQ9H7C4 482 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ZFP64Q9NPA5 681 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 PIGVQ9NUD9 493 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 PCMTD2Q9NV79 361 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 ANO10Q9NW15 660 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 LIMA1Q9UHB6 759 aaKnown RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 TMEM59LQ9UK28 342 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 NOCTQ9UK39 431 aaKnown RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 HS3ST2Q9Y278 367 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 NCKAP1Q9Y2A7 1128 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 SIK3Q9Y2K2 1263 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 OR51B4Q9Y5P0 310 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 HS3ST4Q9Y661 456 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
PTPN20-208ENST00000395727 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
PTPN20-208ENST00000395727 A0A1W2PPC4 97 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 TMEM8BA6NDV4 472 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 LGALS16A8MUM7 142 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 GOLGA6L22H0YM25 854 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 I6L893 689 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 M0QYT0 321 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 FLRT2O43155 660 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 LATO43561 262 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 DFNA5O60443 496 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CBFA2T3O75081 653 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 IGHV4-34P06331 123 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 PNMA6AP0CW24 399 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF18P17022 549 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 MMP8P22894 467 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 RDXP35241 583 aaKnown RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 SOX5P35711 763 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 FLT3P36888 993 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 NNMTP40261 264 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CCNFP41002 786 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 PTPN9P43378 593 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 KIR3DL1P43629 444 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CCR5P51681 352 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CDR2Q01850 454 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 RAPGEF1Q13905 1077 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 STX1AQ16623 288 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 FKBP15Q5T1M5 1219 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 FAM102AQ5T9C2 384 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 RNF219Q5W0B1 726 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CCDC81Q6ZN84 652 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 MMS22LQ6ZRQ5 1243 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 APTXQ7Z2E3 356 aaKnown RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 DSG4Q86SJ6 1040 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 WFDC3Q8IUB2 231 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CREBRFQ8IUR6 639 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 APCDD1Q8J025 514 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 CFAP52Q8N1V2 620 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 MFSD4AQ8N468 514 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 ZCCHC9Q8N567 271 aaKnown RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 TAB3Q8N5C8 712 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 SH2D3CQ8N5H7 860 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 ZNF366Q8N895 744 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 DCAF4L2Q8NA75 395 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 ANKRD20A12PQ8NF67 263 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 OR2T34Q8NGX1 318 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 IGSF8Q969P0 613 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 BIRC7Q96CA5 298 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 RPRD1AQ96P16 312 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 BPIFA3Q9BQP9 254 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 FEM1AQ9BSK4 669 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 C6orf106Q9H6K1 298 aaPredicted RBP6.28□□□□□ -1.4
PTPN20-208ENST00000395727 WDCPQ9H6R7 721 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 TM9SF3Q9HD45 589 aa6.28□□□□□ -1.4
PTPN20-208ENST00000395727 FBXL12Q9NXK8 326 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms