RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 SCN9AQ15858 1988 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 ALBP02768 609 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 S100BP04271 92 aaPredicted RBP16.27■□□□□ 0.2
PCDH1-203ENST00000394536 PRKAA2P54646 552 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 FRG1Q14331 258 aaKnown RBP16.27■□□□□ 0.2
PCDH1-203ENST00000394536 VPS26BQ4G0F5 336 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 GPR158Q5T848 1215 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 ZC3HC1Q86WB0 502 aaKnown RBP16.27■□□□□ 0.2
PCDH1-203ENST00000394536 SPPL2CQ8IUH8 684 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 BHMTQ93088 406 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 RTP4Q96DX8 246 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 RRN3Q9NYV6 651 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 TTC24A2A3L6 582 aaPredicted RBP16.27■□□□□ 0.19
PCDH1-203ENST00000394536 ZBTB42B2RXF5 422 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 BRCC3P46736 316 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 CLEC20AQ6ZU45 233 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 ZBED3Q96IU2 234 aaPredicted RBP16.27■□□□□ 0.19
PCDH1-203ENST00000394536 GLOD4Q9HC38 313 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 ENTPD7Q9NQZ7 604 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 ADARB2Q9NS39 739 aaKnown RBP16.27■□□□□ 0.19
PCDH1-203ENST00000394536 HACD3Q9P035 362 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.19
PCDH1-203ENST00000394536 TRMUO75648 421 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 LINC00032P0C843 101 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 YWHAQP27348 245 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 CPOXP36551 454 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 TRIM25Q14258 630 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 ADRM1Q16186 407 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 OSTM1Q86WC4 334 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 SPNS2Q8IVW8 549 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 BRD8Q9H0E9 1235 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 EIF2B3Q9NR50 452 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 C17orf102A2RUQ5 167 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 GLP2RO95838 553 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 PCNAP12004 261 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 HGFP14210 728 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 MS4A2Q01362 244 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 NIPAL4Q0D2K0 466 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 SNX17Q15036 470 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 MRNIPQ6NTE8 343 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 HNRNPABQ99729 332 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 FBRSL1Q9HCM7 1045 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 AFF4Q9UHB7 1163 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 CPA4Q9UI42 421 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 SF3B1O75533 1304 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 PDLIM1O00151 329 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 SLC1A2P43004 574 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 SERPINH1P50454 418 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 MFSD10Q14728 455 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 PLCL1Q15111 1095 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 HSF5Q4G112 596 aaPredicted RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 C10orf120Q5SQS8 335 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 ABI1Q8IZP0 508 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 CRYBG2Q8N1P7 616 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 THUMPD3Q9BV44 507 aaKnown RBP16.26■□□□□ 0.19
PCDH1-203ENST00000394536 PREBQ9HCU5 417 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 CNGB3Q9NQW8 809 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 TBC1D23Q9NUY8 699 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 VWA7Q9Y334 891 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 ASB3Q9Y575 518 aa16.26■□□□□ 0.19
PCDH1-203ENST00000394536 SYCE1LA8MT33 242 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 C9IYK1 514 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 IPO13O94829 963 aaKnown RBP16.25■□□□□ 0.19
PCDH1-203ENST00000394536 GJA9P57773 515 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 DAOAP59103 153 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 ARHGAP36Q6ZRI8 547 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 SH2D5Q6ZV89 423 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 GPC2Q8N158 579 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 MYLPFQ96A32 169 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 VRTNQ9H8Y1 702 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 NDFIP2Q9NV92 336 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 MKS1Q9NXB0 559 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 GIMAP2Q9UG22 337 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 RSL24D1Q9UHA3 163 aaKnown RBP16.25■□□□□ 0.19
PCDH1-203ENST00000394536 ODC1P11926 461 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 EDNRBP24530 442 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 GK3PQ14409 553 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 PPP1R3AQ16821 1122 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 CMPK2Q5EBM0 449 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 SLC22A9Q8IVM8 553 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 CBR4Q8N4T8 237 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 SCAMP5Q8TAC9 235 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 RDH11Q8TC12 318 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.25■□□□□ 0.19
PCDH1-203ENST00000394536 RAB26Q9ULW5 256 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 OR51F1A6NGY5 319 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 PAGE1O75459 146 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
PCDH1-203ENST00000394536 IL1BP01584 269 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 RENBPP51606 427 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 RBM20Q5T481 1227 aaKnown RBP16.25■□□□□ 0.19
PCDH1-203ENST00000394536 MAVSQ7Z434 540 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 TLK2Q86UE8 772 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms