RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IGSF9Q9P2J2 1179 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 HTR3EA5X5Y0 456 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 OXSR1O95747 527 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 CA8P35219 290 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 MERTKQ12866 999 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 RNF139Q8WU17 664 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.234e-10■■■■□ 24.5
PHTF1-205ENST00000393357 C18orf25Q96B23 403 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 PLK2Q9NYY3 685 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 DFFAO00273 331 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ATP5BP06576 529 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 SBK3P0C264 359 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 POLR2IP36954 125 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ALDH3B2P48448 385 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ADIGQ0VDE8 80 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 RGS21Q2M5E4 152 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ZBED5Q49AG3 693 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ESRP1Q6NXG1 681 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ZC3H15Q8WU90 426 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 EDEM1Q92611 657 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 RNF34Q969K3 372 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 MAML3Q96JK9 1138 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 TMEM74Q96NL1 305 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 EEF2KO00418 725 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 TPD52L2O43399 206 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 CBFA2T3O75081 653 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ESRRBO95718 433 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 IST1P53990 364 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 MLLT10P55197 1068 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ECT2LQ008S8 904 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 DGCR6Q14129 220 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 ADRM1Q16186 407 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 SYPL2Q5VXT5 272 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 METTL21CQ5VZV1 264 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 SLC7A14Q8TBB6 771 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 BORCS5Q969J3 196 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 CCDC138Q96M89 665 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 RNF145Q96MT1 663 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 NPLQ9BXD5 320 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-205ENST00000393357 CDHR5Q9HBB8 845 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 GID8Q9NWU2 228 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 MORF4L1Q9UBU8 362 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
PHTF1-205ENST00000393357 DHRS12A0PJE2 317 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 KPNA6O60684 536 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 RSL1D1O76021 490 aaKnown RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ZFXP17010 805 aaPredicted RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 CHRNA4P43681 627 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 TAS2R39P59534 338 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 PFKPQ01813 784 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF470Q6ECI4 717 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 RNF19BQ6ZMZ0 732 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF354CQ86Y25 554 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 CROCCP3Q8IVE0 287 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 SLC15A3Q8IY34 581 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 HEXDCQ8WVB3 486 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 CASP10Q92851 521 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 KCNA7Q96RP8 456 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 NEURL2Q9BR09 285 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 HIPK3Q9H422 1215 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 TTC24A2A3L6 582 aaPredicted RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 STX5Q13190 355 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 POLD3Q15054 466 aaPredicted RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF789Q5FWF6 425 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 NHSL2Q5HYW2 709 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 SDCCAG3Q96C92 435 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ITCHQ96J02 903 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 TCF12Q99081 682 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 BEGAINQ9BUH8 593 aa16.5■□□□□ 0.23
PHTF1-205ENST00000393357 PNMA8BQ9ULN7 279 aaPredicted RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 MAFBQ9Y5Q3 323 aaPredicted RBP16.5■□□□□ 0.23
PHTF1-205ENST00000393357 ZCWPW2A0A1B0GU75 182 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 FAM95CA0A1B0GW59 222 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 NCF1BA6NI72 391 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 NCF1CA8MVU1 366 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 BTBD19C9JJ37 291 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 AP3B1O00203 1094 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 TSPAN3O60637 253 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ALDH1A2O94788 518 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 SNRPB2P08579 225 aaKnown RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 SLC35E2BP0CK96 405 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 NCF1P14598 390 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 AP3M2P53677 418 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 STX1BP61266 288 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 SLC10A6Q3KNW5 377 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ANKRD34AQ69YU3 496 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 HEATR4Q86WZ0 1026 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 RALGPS2Q86X27 583 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CMTR2Q8IYT2 770 aaKnown RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CENPLQ8N0S6 344 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CLEC4FQ8N1N0 589 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 KDM1BQ8NB78 822 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 OR10Q1Q8NGQ4 319 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms