RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 PSMD12O00232 456 aaPredicted RBP18.17■□□□□ 0.5
ERCC2-201ENST00000391941 USP2O75604 605 aaPredicted RBP18.17■□□□□ 0.5
ERCC2-201ENST00000391941 KCNC1P48547 511 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 PLA2G4EQ3MJ16 856 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 ELMSAN1Q6PJG2 1045 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 PAQR9Q6ZVX9 377 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 CATSPER4Q7RTX7 472 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 RETREG3Q86VR2 466 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 SIX6OS1Q8N1H7 587 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 MIPOL1Q8TD10 442 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 ZNF597Q96LX8 424 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 NPY6RQ99463 290 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 OLFM1Q99784 485 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 MCMBPQ9BTE3 642 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 SMOXQ9NWM0 555 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 MYRFQ9Y2G1 1151 aa18.17■□□□□ 0.5
ERCC2-201ENST00000391941 UBFD1O14562 309 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 B4GAT1O43505 415 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 TADA2AO75478 443 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 ZNF23P17027 643 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 TPP2P29144 1249 aaPredicted RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 OXTRP30559 389 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 PRKCQQ04759 706 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 SLC12A1Q13621 1099 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 LRP8Q14114 963 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 PAFAH1B3Q15102 231 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 USP41Q3LFD5 358 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 FASTKD5Q7L8L6 764 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 RYBPQ8N488 228 aaPredicted RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 IL22Q9GZX6 179 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 RHOJQ9H4E5 214 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 LOC285556D6RIA3 1793 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 PAPPA2Q9BXP8 1791 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 ADM5C9JUS6 153 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 MRASO14807 208 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 ATE1O95260 518 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 CAPNS1P04632 268 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 LRPAP1P30533 357 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 HSPA13P48723 471 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 AFF1P51825 1210 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 NAA20P61599 178 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 KYAT1Q16773 422 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 UNC93AQ86WB7 457 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 DDI1Q8WTU0 396 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 ANKRD49Q8WVL7 239 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 CYGBQ8WWM9 190 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 RANBP9Q96S59 729 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 FICDQ9BVA6 458 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 GBA3Q9H227 469 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 TUT1Q9H6E5 874 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 USP22Q9UPT9 525 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 HEATR9A2RTY3 570 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 MEIS3P2A8K0S8 358 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 UBDO15205 165 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 MTHFD1P11586 935 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 STMN1P16949 149 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 YBX3P16989 372 aaKnown RBP eCLIP18.16■□□□□ 0.57e-8■□□□□ 8.2
ERCC2-201ENST00000391941 GRM5P41594 1212 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 CSE1LP55060 971 aaKnown RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 RAB10P61026 200 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 RHDQ02161 417 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 PLCL1Q15111 1095 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 GPR107Q5VW38 600 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 PIM3Q86V86 326 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 IFNLR1Q8IU57 520 aaPredicted RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 B3GALNT2Q8NCR0 500 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 WNT8BQ93098 351 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 ARMC7Q9H6L4 198 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 NDFIP2Q9NV92 336 aa18.16■□□□□ 0.5
ERCC2-201ENST00000391941 EVLQ9UI08 416 aaPredicted RBP18.16■□□□□ 0.5
ERCC2-201ENST00000391941 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 NR5A2O00482 541 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 SLC22A2O15244 555 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 GPC4O75487 556 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 NCK1P16333 377 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 NOS2P35228 1153 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 SCNN1AP37088 669 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 ARHGAP1Q07960 439 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 HERC3Q15034 1050 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 VPS26BQ4G0F5 336 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 OGFOD2Q6N063 350 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 EPHX4Q8IUS5 362 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 C12orf43Q96C57 262 aaKnown RBP18.15■□□□□ 0.5
ERCC2-201ENST00000391941 SNX27Q96L92 541 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 ZFP42Q96MM3 310 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 WDR6Q9NNW5 1121 aaKnown RBP18.15■□□□□ 0.5
ERCC2-201ENST00000391941 VTI1BQ9UEU0 232 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 MID2Q9UJV3 735 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 ZNF510Q9Y2H8 683 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 A0A1W2PPW3 197 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 OR51F1A6NGY5 319 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 LRIG2O94898 1065 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 APOA4P06727 396 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 RPL34P49207 117 aaKnown RBP18.15■□□□□ 0.5
ERCC2-201ENST00000391941 KCTD2Q14681 263 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 MARCH8Q5T0T0 291 aa18.15■□□□□ 0.5
ERCC2-201ENST00000391941 CYHR1Q6ZMK1 362 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms