RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ZNF284Q2VY69 593 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 ANKRD20A8PQ5CZ79 823 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 PSAPL1Q6NUJ1 521 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 BRAT1Q6PJG6 821 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 SRLQ86TD4 932 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 TMEM145Q8NBT3 493 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 TSEN2Q8NCE0 465 aaKnown RBP12.82□□□□□ -0.36
GGPS1-203ENST00000391855 DENND6BQ8NEG7 585 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 OR2I1PQ8NGU4 316 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 VOPP1Q96AW1 172 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 SUV39H2Q9H5I1 410 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 ERVMER34-1Q9H9K5 563 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 ETNK2Q9NVF9 386 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 DDX56Q9NY93 547 aaKnown RBP12.82□□□□□ -0.36
GGPS1-203ENST00000391855 IMPACTQ9P2X3 320 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
GGPS1-203ENST00000391855 A0A1B0GTQ1 180 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-203ENST00000391855 TLR4O00206 839 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 PCDHGA12O60330 932 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 MAFKO60675 156 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 CD48P09326 243 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 MX2P20592 715 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 ARRB1P49407 418 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-203ENST00000391855 NXPH1P58417 271 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 GALNT2Q10471 571 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 ODF2Q5BJF6 829 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 NCBP2-AS2Q69YL0 99 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 TIGD7Q6NT04 549 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-203ENST00000391855 LAYNQ6UX15 382 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 ARHGAP36Q6ZRI8 547 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 TTC7BQ86TV6 843 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 NAXDQ8IW45 347 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 RHOT1Q8IXI2 618 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 DEFB124Q8NES8 71 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 PCDH19Q8TAB3 1148 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 FATE1Q969F0 183 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 ZNF830Q96NB3 372 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-203ENST00000391855 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-203ENST00000391855 C1QTNF7Q9BXJ2 289 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 EPN1Q9Y6I3 576 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-203ENST00000391855 CACNA1AO00555 2505 aa12.81□□□□□ -0.36
GGPS1-203ENST00000391855 MED19A0JLT2 244 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 LRRD1A4D1F6 860 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SLC31A1O15431 190 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SPOPO43791 374 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 MFSD11O43934 449 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SOCS5O75159 536 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 NDUFA10O95299 355 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 WNT1P04628 370 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 ZFXP17010 805 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 KDELR1P24390 212 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 NFKBIAP25963 317 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 NOP2P46087 812 aaKnown RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 BCL2L1Q07817 233 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SLC10A7Q0GE19 358 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SGCGQ13326 291 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 IFI16Q16666 785 aaKnown RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 MARC1Q5VT66 337 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SEL1L3Q68CR1 1132 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 ERAP2Q6P179 960 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 KYAT3Q6YP21 454 aaKnown RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 CPNE8Q86YQ8 564 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 DCP2Q8IU60 420 aaKnown RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 TXLNBQ8N3L3 684 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 KLHDC7BQ96G42 594 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 LENG8Q96PV6 779 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 NUDCD1Q96RS6 583 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 MGME1Q9BQP7 344 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 C1QTNF2Q9BXJ5 285 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 SLC17A9Q9BYT1 436 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 AMACRQ9UHK6 382 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 ZFR2Q9UPR6 939 aaKnown RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 PCDHA13Q9Y5I0 950 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 HS3ST3A1Q9Y663 406 aa12.8□□□□□ -0.36
GGPS1-203ENST00000391855 ASCC3Q8N3C0 2202 aaKnown RBP12.8□□□□□ -0.36
GGPS1-203ENST00000391855 A6NNZ2 444 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 H0Y8X5 98 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 WNT9AO14904 365 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 INSIG1O15503 277 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PIGNO95427 931 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PEX11BO96011 259 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 KRT1P04264 644 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PRLRP16471 622 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 GARSP41250 739 aaKnown RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 GRK6P43250 576 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 MMP13P45452 471 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 RXRGP48443 463 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 POLR2LP62875 67 aaKnown RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 UGP2Q16851 508 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 C11orf63Q6NUN7 778 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 DBX2Q6ZNG2 339 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 ABI3BPQ7Z7G0 1075 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TP53INP2Q8IXH6 220 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PAF1Q8N7H5 531 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms