RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 SPATS2LQ9NUQ6 558 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 MCM9Q9NXL9 1143 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 MORF4L1Q9UBU8 362 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 FETUBQ9UGM5 382 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CD207Q9UJ71 328 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 RASAL2Q9UJF2 1139 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SERTAD3Q9UJW9 196 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ADAMTS5Q9UNA0 930 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SH2B3Q9UQQ2 575 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SLC27A6Q9Y2P4 619 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 RRP15Q9Y3B9 282 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TRPV2Q9Y5S1 764 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 COL15A1P39059 1388 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 hCG_1809904A0A1W2PP81 198 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 A0A1W2PPE2 198 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 A0A1W2PR64 198 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 A0A1W2PR77 199 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 A1L4Q6 167 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 RGSL1A5PLK6 1076 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 A8MZ25 164 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TEX22C9J3V5 150 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 H7C1Q1 480 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 K7EPI3 171 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SLC16A3O15427 465 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 CCP110O43303 1012 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 VEGFDO43915 354 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TLR2O60603 784 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 KERAO60938 352 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 CNOT3O75175 753 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 USP12O75317 370 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TBCAO75347 108 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TULP3O75386 442 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 NME6O75414 186 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TADA2AO75478 443 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TSPAN9O75954 239 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 CSPG5O95196 566 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 RASAL1O95294 804 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SLU7O95391 586 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 METTL18O95568 372 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 GNAI3P08754 354 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 XRCC6P12956 609 aaKnown RBP eCLIP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 STMN1P16949 149 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 GAP43P17677 238 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 FPR3P25089 353 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 MCM3P25205 808 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ADORA2AP29274 412 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 MC5RP33032 325 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TTKP33981 857 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 GRK5P34947 590 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 BSGP35613 385 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 GP5P40197 560 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 VIPR2P41587 438 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 MTHFRP42898 656 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 MSH2P43246 934 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 NRIP1P48552 1158 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 NPY4RP50391 375 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SUOXP51687 545 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 PMS2P54278 862 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 CDH8P55286 799 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 STARD6P59095 220 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 GNAI1P63096 354 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ACOX1Q15067 660 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TRIP6Q15654 476 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TWIST1Q15672 202 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 AAK1Q2M2I8 961 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ALG11Q2TAA5 492 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SLC39A12Q504Y0 691 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 PLAC9Q5JTB6 97 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 PCID2Q5JVF3 399 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 C10orf25Q5T742 122 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 GKAP1Q5VSY0 366 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 DENND1BQ6P3S1 775 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 NCEH1Q6PIU2 408 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 CPLX2Q6PUV4 134 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 CLEC9AQ6UXN8 241 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 NHLRC1Q6VVB1 395 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 BCDIN3DQ7Z5W3 292 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 THNSL1Q8IYQ7 743 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 PNLDC1Q8NA58 520 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 POC5Q8NA72 575 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 POGLUT1Q8NBL1 392 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TMEM116Q8NCL8 245 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ZBTB44Q8NCP5 570 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 RP9Q8TA86 221 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SLC2A12Q8TD20 617 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 DUSP19Q8WTR2 217 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SOCS4Q8WXH5 440 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ZKSCAN4Q969J2 545 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 ARRDC3Q96B67 414 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 INTS12Q96CB8 462 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TMCO6Q96DC7 493 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SIPA1Q96FS4 1042 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TRMT61AQ96FX7 289 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 FIZ1Q96SL8 496 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 NAA11Q9BSU3 229 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 THUMPD3Q9BV44 507 aaKnown RBP2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 SCNM1Q9BWG6 230 aa2.26□□□□□ -2.05
SNORA40.19-201ENST00000390846 TEX13BQ9BXU2 312 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms