RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TFPIP10646 304 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 CTPS1P17812 591 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 CLCN5P51795 746 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 EFNA5P52803 228 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 HDAC4P56524 1084 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 CSTF3Q12996 717 aaKnown RBP5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 ITGADQ13349 1161 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 SMTNL2Q2TAL5 461 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 MFSD4BQ5TF39 518 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 KLHL35Q6PF15 583 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 TDRPQ86YL5 185 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 FAM217AQ8IXS0 508 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 TEX11Q8IYF3 940 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 CADM3Q8N126 398 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 ZCCHC9Q8N567 271 aaKnown RBP5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 EME1Q96AY2 570 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 PERPQ96FX8 193 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 CMTM3Q96MX0 182 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 TASP1Q9H6P5 420 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 BPIFA1Q9NP55 256 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 SPAG4Q9NPE6 437 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 NRIP3Q9NQ35 241 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 ASAH2Q9NR71 780 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 SLC6A13Q9NSD5 602 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 CLIC5Q9NZA1 410 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 FLRT1Q9NZU1 646 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 UTYO14607 1347 aa5.67□□□□□ -1.5
RNU6-40P-201ENST00000384254 TRBV5-3A0A0A0MS03 114 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 hCG_1807616A0A1W2PRN6 198 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 LIASO43766 372 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 AHCYL1O43865 530 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 LATS1O95835 1130 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 ENO3P13929 434 aaPredicted RBP5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 CDAP32320 146 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 ACTN2P35609 894 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 PSMB10P40306 273 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 RAD52P43351 418 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 TMPRSS3P57727 454 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 NLRP5P59047 1200 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 ACVR2BQ13705 512 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 TCTN1Q2MV58 587 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 SLC18B1Q6NT16 456 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 FAM83HQ6ZRV2 1179 aaPredicted RBP5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 SZRD1Q7Z422 152 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 YTHDF3Q7Z739 585 aaKnown RBP5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 TRIM74Q86UV6 250 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 TRIM73Q86UV7 250 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 ARHGAP12Q8IWW6 846 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 C17orf53Q8N3J3 647 aaPredicted RBP5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 WDTC1Q8N5D0 677 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 PSPC1Q8WXF1 523 aaKnown RBP5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 ZFYVE19Q96K21 471 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 B3GNT4Q9C0J1 378 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 CDT1Q9H211 546 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 TMEM184CQ9NVA4 438 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 COX11Q9Y6N1 276 aa5.66□□□□□ -1.5
RNU6-40P-201ENST00000384254 KCNU1A8MYU2 1149 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 HSPB6O14558 160 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 SEC14L5O43304 696 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 ZC3H11AO75152 810 aaKnown RBP eCLIP5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 NDUFS3O75489 264 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 BCAR3O75815 825 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 TOP3BO95985 862 aaKnown RBP5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 CSH1P0DML2 217 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 CSH2P0DML3 217 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 RARGP13631 454 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 PORP16435 677 aaPredicted RBP5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 TM4SF1P30408 202 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 TNFSF8P32971 234 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 HADHAP40939 763 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 PIP4K2AP48426 406 aaPredicted RBP5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 CLDN2P57739 230 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 NIPAL4Q0D2K0 466 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 OLIG2Q13516 323 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 DUSP28Q4G0W2 176 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 PLEKHO1Q53GL0 409 aaPredicted RBP5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 PIK3CD-AS1Q5SR53 167 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 HEPHL1Q6MZM0 1159 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 C16orf54Q6UWD8 224 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 TMCO3Q6UWJ1 677 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 DEF8Q6ZN54 512 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 ENOSF1Q7L5Y1 443 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 PALB2Q86YC2 1186 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 TICAM1Q8IUC6 712 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 DENND6AQ8IWF6 608 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 GJC3Q8NFK1 279 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 DPF1Q92782 380 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 JAKMIP2Q96AA8 810 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 ERP27Q96DN0 273 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 FEM1CQ96JP0 617 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 YME1L1Q96TA2 773 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 MXRA8Q9BRK3 442 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 LHPPQ9H008 270 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 KIF9Q9HAQ2 790 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 SCPEP1Q9HB40 452 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 ADARB2Q9NS39 739 aaKnown RBP5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 SESN1Q9Y6P5 492 aa5.65□□□□□ -1.5
RNU6-40P-201ENST00000384254 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
RNU6-40P-201ENST00000384254 KLRF2D3W0D1 207 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms