RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 ZNF567Q8N184 647 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 CDK5RAP1Q96SZ6 601 aaKnown RBP17.28■□□□□ 0.36
SGCB-201ENST00000381431 PCDHB9Q9Y5E1 797 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 LTN1O94822 1766 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TRIM38O00635 465 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 LRIG2O94898 1065 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TYMPP19971 482 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 ICAM3P32942 547 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 BLVRAP53004 296 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 CCDC142Q17RM4 750 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TMEM26Q6ZUK4 368 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 FAM228AQ86W67 206 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 NKAPQ8N5F7 415 aaKnown RBP17.28■□□□□ 0.36
SGCB-201ENST00000381431 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
SGCB-201ENST00000381431 UGT1A9O60656 530 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 MT-CYBP00156 380 aaPredicted RBP17.28■□□□□ 0.36
SGCB-201ENST00000381431 GRM3Q14832 879 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
SGCB-201ENST00000381431 MAPK11Q15759 364 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 DCBLD1Q8N8Z6 715 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 ABHD8Q96I13 439 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TMEM106CQ9BVX2 250 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 FAM126AQ9BYI3 521 aaPredicted RBP17.28■□□□□ 0.36
SGCB-201ENST00000381431 UGT1A7Q9HAW7 530 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 UGT1A10Q9HAW8 530 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 UGT1A8Q9HAW9 530 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TCRBV7S3A2A0A539 114 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 PLIN3O60664 434 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 SIN3BO75182 1162 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 DLG2Q15700 870 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 TIGD2Q4W5G0 525 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 ANKS1BQ7Z6G8 1248 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 RPL26L1Q9UNX3 145 aaKnown RBP17.27■□□□□ 0.36
SGCB-201ENST00000381431 TRAF6Q9Y4K3 522 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 TK2O00142 265 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 MSCO60682 206 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 METTL18O95568 372 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 RRM2P31350 389 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 GPD2P43304 727 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 IRF8Q02556 426 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 MAD2L1Q13257 205 aaPredicted RBP17.27■□□□□ 0.36
SGCB-201ENST00000381431 SQLEQ14534 574 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 HECTD3Q5T447 861 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 MARK2Q7KZI7 788 aaKnown RBP17.27■□□□□ 0.36
SGCB-201ENST00000381431 UGT2B28Q9BY64 529 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 FAM192AQ9GZU8 254 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 CACNA2D2Q9NY47 1150 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 TAS2R1Q9NYW7 299 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 GON4LQ3T8J9 2241 aa17.27■□□□□ 0.36
SGCB-201ENST00000381431 AZIN1O14977 448 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 GRIA1P42261 906 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 LILRA4P59901 499 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 NOMO2Q5JPE7 1267 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 GK5Q6ZS86 529 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 TRIM69Q86WT6 500 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 STX19Q8N4C7 294 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 SLC35B2Q8TB61 432 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 LENG8Q96PV6 779 aaPredicted RBP17.27■□□□□ 0.35
SGCB-201ENST00000381431 ABCG8Q9H221 673 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 TMEM245Q9H330 911 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 PALMDQ9NP74 551 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 MTF2Q9Y483 593 aaPredicted RBP17.27■□□□□ 0.35
SGCB-201ENST00000381431 AP4B1Q9Y6B7 739 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 FMN2Q9NZ56 1722 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 MYBPHLA2RUH7 354 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 C9JVG2 144 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 RGS14O43566 566 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 CNOT3O75175 753 aaKnown RBP17.27■□□□□ 0.35
SGCB-201ENST00000381431 IGSF6O95976 241 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 CSH1P0DML2 217 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 CSH2P0DML3 217 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 CTPS1P17812 591 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 CYP2A7P20853 494 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 RPL9P32969 192 aaKnown RBP17.27■□□□□ 0.35
SGCB-201ENST00000381431 CPSF6Q16630 551 aaKnown RBP eCLIP17.27■□□□□ 0.35
SGCB-201ENST00000381431 ERAP2Q6P179 960 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 SPESP1Q6UW49 350 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 GCNT7Q6ZNI0 430 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 CLYBLQ8N0X4 340 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 ZNF276Q8N554 614 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 TSPAN14Q8NG11 270 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 OR6K2Q8NGY2 324 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 STN1Q9H668 368 aaKnown RBP17.27■□□□□ 0.35
SGCB-201ENST00000381431 DTLQ9NZJ0 730 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 AK5Q9Y6K8 562 aa17.27■□□□□ 0.35
SGCB-201ENST00000381431 ATXN2Q99700 1313 aaKnown RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 TM7SF2O76062 418 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 MMP3P08254 477 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 HOXC6P09630 235 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 MPP1Q00013 466 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 SP2Q02086 613 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 FOLH1Q04609 750 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 PCBP1Q15365 356 aaKnown RBP eCLIP17.26■□□□□ 0.35
SGCB-201ENST00000381431 MAPKAPK3Q16644 382 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 TDRPQ86YL5 185 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 PQLC1Q8N2U9 271 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 ZCCHC7Q8N3Z6 543 aaKnown RBP17.26■□□□□ 0.35
SGCB-201ENST00000381431 RORBQ92753 470 aa17.26■□□□□ 0.35
SGCB-201ENST00000381431 PANX3Q96QZ0 392 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms