RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PPP1R15BQ5SWA1 713 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 LRRC69Q6ZNQ3 347 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 APTXQ7Z2E3 356 aaKnown RBP13.16□□□□□ -0.3
RPAIN-202ENST00000381208 PDZD3Q86UT5 571 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 MARCH9Q86YJ5 346 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 CXorf40AQ8TE69 158 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 GLMNQ92990 594 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 KLHL32Q96NJ5 620 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 KLF6Q99612 283 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-202ENST00000381208 CHD5Q8TDI0 1954 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 DOCK9Q9BZ29 2069 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 FFAR2O15552 330 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 RRP8O43159 456 aaKnown RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 MT-CO3P00414 261 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 GZMAP12544 262 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 THOP1P52888 689 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 TPI1P60174 286 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 PFN3P60673 137 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 RPL7AP62424 266 aaKnown RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 INSM1Q01101 510 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 TYRO3Q06418 890 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 PDE1CQ14123 709 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 ZCCHC8Q6NZY4 707 aaKnown RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 C19orf48Q6RUI8 117 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 IRF2BP2Q7Z5L9 587 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 DNAAF5Q86Y56 855 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 OR6K2Q8NGY2 324 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 TPCN2Q8NHX9 752 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 FNIP1Q8TF40 1166 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 GRAMD1AQ96CP6 724 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 HMCESQ96FZ2 354 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 UCKL1Q9NWZ5 548 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 UBA2Q9UBT2 640 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 RALYQ9UKM9 306 aaKnown RBP13.15□□□□□ -0.3
RPAIN-202ENST00000381208 ACTL7AQ9Y615 435 aa13.15□□□□□ -0.3
RPAIN-202ENST00000381208 A0A1W2PQC6 194 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ARHGAP42A6NI28 874 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 TMEM110-MUSTN1A8MSY1 372 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 K7ESM1 405 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 RAD51BO15315 384 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 RNF8O76064 485 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 JUNDP17535 347 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 PSMA2P25787 234 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 GKP32189 559 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ACTN2P35609 894 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ABCG1P45844 678 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 RPIAP49247 311 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 BLKP51451 505 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 MAMLD1Q13495 774 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ATXN7L2Q5T6C5 722 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-202ENST00000381208 PLEKHA7Q6IQ23 1121 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 BRAT1Q6PJG6 821 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 LSMEM2Q8N112 164 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ZNF548Q8NEK5 533 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-202ENST00000381208 SNIP1Q8TAD8 396 aaKnown RBP13.14□□□□□ -0.31
RPAIN-202ENST00000381208 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
RPAIN-202ENST00000381208 CENPTQ96BT3 561 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 TRIM11Q96F44 468 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ZNF641Q96N77 438 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-202ENST00000381208 TUBGCP5Q96RT8 1024 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 ABCG4Q9H172 646 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
RPAIN-202ENST00000381208 AQP9O43315 295 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 OPA1O60313 960 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 GIMD1P0DJR0 217 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 CSNK1DP48730 415 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 PEX5P50542 639 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 RFTN1Q14699 578 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-202ENST00000381208 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 SDR16C5Q8N3Y7 309 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 FGF11Q92914 225 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 MAGEB5Q9BZ81 275 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 SLC13A1Q9BZW2 595 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 SUV39H2Q9H5I1 410 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 MRPL47Q9HD33 250 aaKnown RBP13.13□□□□□ -0.31
RPAIN-202ENST00000381208 AIPL1Q9NZN9 384 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 AP4E1Q9UPM8 1137 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 SCINQ9Y6U3 715 aa13.13□□□□□ -0.31
RPAIN-202ENST00000381208 ADAMTS20P59510 1910 aa13.12□□□□□ -0.31
RPAIN-202ENST00000381208 TSPAN11A1L157 253 aa13.12□□□□□ -0.31
RPAIN-202ENST00000381208 CFAP69A5D8W1 941 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms