RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 DPF3Q92784 378 aa11.73□□□□□ -0.53
PITRM1-202ENST00000380989 ATP6V1E2Q96A05 226 aa11.73□□□□□ -0.53
PITRM1-202ENST00000380989 TTPALQ9BTX7 342 aa11.73□□□□□ -0.53
PITRM1-202ENST00000380989 FAM124BQ9H5Z6 455 aaPredicted RBP11.73□□□□□ -0.53
PITRM1-202ENST00000380989 SSU72Q9NP77 194 aaKnown RBP11.73□□□□□ -0.53
PITRM1-202ENST00000380989 INIPQ9NRY2 104 aa11.73□□□□□ -0.53
PITRM1-202ENST00000380989 LTBP2Q14767 1821 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 UGT1A6P19224 532 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 GLRBP48167 497 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SLC5A3P53794 718 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 PPIDQ08752 370 aaKnown RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 PIGHQ14442 188 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 TMEM240Q5SV17 173 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 COL13A1Q5TAT6 717 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 KIAA1841Q6NSI8 718 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 PGM2L1Q6PCE3 622 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 ZNF534Q76KX8 674 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 BHLHA9Q7RTU4 235 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 PQLC1Q8N2U9 271 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 ARHGAP18Q8N392 663 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 CCDC185Q8N715 623 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 NPAS2Q99743 824 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SUDS3Q9H7L9 328 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 NCAM1P13591 858 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 AOC1P19801 751 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SDC4P31431 198 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 RXRGP48443 463 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 NAA20P61599 178 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 RALGDSQ12967 914 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 OTUD1Q5VV17 481 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 LAYNQ6UX15 382 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SDCCAG8Q86SQ7 713 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 WDR75Q8IWA0 830 aaKnown RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 FBXW8Q8N3Y1 598 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 PCDH20Q8N6Y1 951 aaKnown RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 RCN3Q96D15 328 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 HSFY1Q96LI6 401 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 CATSPER2Q96P56 530 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 TMCO1Q9UM00 188 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 ZNF189O75820 626 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 COX4I1P13073 169 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 RFC2P35250 354 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 RPL5P46777 297 aaKnown RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 NDST2P52849 883 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 CEACAM7Q14002 265 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 MRPL58Q14197 206 aaKnown RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 APLFQ8IW19 511 aaPredicted RBP11.72□□□□□ -0.53
PITRM1-202ENST00000380989 NUF2Q9BZD4 464 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SSX2IPQ9Y2D8 614 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 SNX10Q9Y5X0 201 aa11.72□□□□□ -0.53
PITRM1-202ENST00000380989 C9JVG2 144 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 TRMUO75648 421 aaKnown RBP11.71□□□□□ -0.53
PITRM1-202ENST00000380989 RNASEH2AO75792 299 aaKnown RBP11.71□□□□□ -0.53
PITRM1-202ENST00000380989 ZBED1O96006 694 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 APOEP02649 317 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 GNAO1P09471 354 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 CKMT2P17540 419 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.53
PITRM1-202ENST00000380989 MPSTP25325 297 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 SULT1E1P49888 294 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 DAOAP59103 153 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 FLOT2Q14254 428 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 C1QTNF12Q5T7M4 302 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 NXNQ6DKJ4 435 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 OGFOD2Q6N063 350 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 RAVER1Q8IY67 606 aaKnown RBP11.71□□□□□ -0.53
PITRM1-202ENST00000380989 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 SLC39A3Q9BRY0 314 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 CSNK1G1Q9HCP0 422 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 THAP1Q9NVV9 213 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 CDC14AQ9UNH5 594 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 PTPRDP23468 1912 aa11.71□□□□□ -0.53
PITRM1-202ENST00000380989 MTMR11A4FU01 709 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 I6L893 689 aaPredicted RBP11.71□□□□□ -0.54
PITRM1-202ENST00000380989 ZNF195O14628 629 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 THRAP10827 490 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 RPL34P49207 117 aaKnown RBP11.71□□□□□ -0.54
PITRM1-202ENST00000380989 ZNF280DQ6N043 979 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 PPP1R2P3Q6NXS1 205 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 XKR5Q6UX68 686 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 KYAT3Q6YP21 454 aaKnown RBP11.71□□□□□ -0.54
PITRM1-202ENST00000380989 SLC26A9Q7LBE3 791 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 NUP93Q8N1F7 819 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.71□□□□□ -0.54
PITRM1-202ENST00000380989 AGAP3Q96P47 875 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 SLC29A1Q99808 456 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 CNPY3Q9BT09 278 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 SOX17Q9H6I2 414 aaPredicted RBP11.71□□□□□ -0.54
PITRM1-202ENST00000380989 NMUR1Q9HB89 426 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 RNF11Q9Y3C5 154 aa11.71□□□□□ -0.54
PITRM1-202ENST00000380989 ZNF638Q14966 1978 aaKnown RBP11.71□□□□□ -0.54
PITRM1-202ENST00000380989 APOC4-APOC2K7ER74 178 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms