RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 IGSF6O95976 241 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 GNSP15586 552 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 KDELR1P24390 212 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 IL4RP24394 825 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 GKP32189 559 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 DRD3P35462 400 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 ADPRHP54922 357 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
HMGN1-202ENST00000380747 RAD51Q06609 339 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 IL10RBQ08334 325 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 MYLK3Q32MK0 819 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 KIAA0895LQ68EN5 471 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 TMEM139Q8IV31 216 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 RHOT1Q8IXI2 618 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 ATPAF2Q8N5M1 289 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 OR2T34Q8NGX1 318 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 PCDH19Q8TAB3 1148 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 FAM71BQ8TC56 605 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 PPP1R16AQ96I34 528 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 EXOC2Q96KP1 924 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 GDAP1L1Q96MZ0 367 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF670Q9BS34 389 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 DESI2Q9BSY9 194 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 CINPQ9BW66 212 aaPredicted RBP9.37□□□□□ -0.91
HMGN1-202ENST00000380747 PCED1AQ9H1Q7 454 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 GOLPH3Q9H4A6 298 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 LHX3Q9UBR4 397 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 EVLQ9UI08 416 aaPredicted RBP9.37□□□□□ -0.91
HMGN1-202ENST00000380747 EIF2B4Q9UI10 523 aaKnown RBP9.37□□□□□ -0.91
HMGN1-202ENST00000380747 ALG6Q9Y672 507 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 DOCK4Q8N1I0 1966 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 CACNA1EQ15878 2313 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3DA0A087WVF3 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3IA0A087WXS9 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3EA0A087X179 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3KA0A087X1G2 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3FA6NER0 549 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 GOLGA6L3A6NEY3 463 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 C4orf47A7E2U8 309 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3LB9A6J9 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 GIPC1O14908 333 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 INSIG1O15503 277 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 SLC7A4O43246 635 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 MFSD11O43934 449 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 MAP3K6O95382 1288 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 POP4O95707 220 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3HP0C7X1 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 HOXD12P35452 270 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 NEK3P51956 506 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 VAV2P52735 878 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 IRX4P78413 519 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 SKOR1P84550 965 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 RFTN1Q14699 578 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 DUOXA1Q1HG43 343 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TMCO4Q5TGY1 634 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 LRRC38Q5VT99 294 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 AGBL4Q5VU57 503 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 NCBP2-AS2Q69YL0 99 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3GQ6DHY5 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3CQ6IPX1 549 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 C11orf63Q6NUN7 778 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 FBXL19Q6PCT2 694 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 GDPD4Q6W3E5 623 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 ERN2Q76MJ5 926 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 RABEPKQ7Z6M1 372 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 RFX6Q8HWS3 928 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TBC1D3Q8IZP1 549 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TXLNBQ8N3L3 684 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 ZCCHC9Q8N567 271 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TPCN2Q8NHX9 752 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 CEP76Q8TAP6 659 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 NSMCE1Q8WV22 266 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 DNASE2BQ8WZ79 361 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 BIRC7Q96CA5 298 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 MAK16Q9BXY0 300 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 GRPEL1Q9HAV7 217 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 TMEM9BQ9NQ34 198 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 DDX56Q9NY93 547 aaKnown RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 SUSD2Q9UGT4 822 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 SLC6A14Q9UN76 642 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-202ENST00000380747 DUSP10Q9Y6W6 482 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 KALRNO60229 2985 aa9.36□□□□□ -0.91
HMGN1-202ENST00000380747 A0A1B0GTW7 788 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 C16orf96A6NNT2 1141 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PSTPIP1O43586 416 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PLRG1O43660 514 aaKnown RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 RNGTTO60942 597 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms