RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF470Q6ECI4 717 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 ALYREFQ86V81 257 aaKnown RBP23.32■■□□□ 1.32
VPS16-201ENST00000380443 ARHGAP24Q8N264 748 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 ATXN3LQ9H3M9 355 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 MARCOQ9UEW3 520 aaPredicted RBP23.32■■□□□ 1.32
VPS16-201ENST00000380443 SLC2A6Q9UGQ3 507 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 MICAL3Q7RTP6 2002 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 ADAM12O43184 909 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 GNA12Q03113 381 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 CTBP1Q13363 440 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 LIPMQ5VYY2 423 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 DENND6AQ8IWF6 608 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 STYXQ8WUJ0 223 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 CLSTN3Q9BQT9 956 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 MFSD1Q9H3U5 465 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.31■■□□□ 1.32
VPS16-201ENST00000380443 UXTQ9UBK9 157 aaPredicted RBP23.31■■□□□ 1.32
VPS16-201ENST00000380443 SEPT3Q9UH03 358 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 RUVBL2Q9Y230 463 aaKnown RBP23.31■■□□□ 1.32
VPS16-201ENST00000380443 SCN5AQ14524 2016 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 GYG2O15488 501 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 HMGA1P17096 107 aaKnown RBP23.31■■□□□ 1.32
VPS16-201ENST00000380443 HOXB8P17481 243 aaPredicted RBP23.31■■□□□ 1.32
VPS16-201ENST00000380443 ACVRL1P37023 503 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 ALDH1A3P47895 512 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 MAXP61244 160 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 MPP1Q00013 466 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 DSG1Q02413 1049 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 SWT1Q5T5J6 900 aaKnown RBP23.31■■□□□ 1.32
VPS16-201ENST00000380443 SLC41A1Q8IVJ1 513 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 PGBD5Q8N414 524 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 CFAP61Q8NHU2 1237 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 IFT43Q96FT9 208 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 HERC2P3Q9BVR0 1158 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 CCDC106Q9BWC9 280 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 TAGLN3Q9UI15 199 aa23.31■■□□□ 1.32
VPS16-201ENST00000380443 MIA3Q5JRA6 1907 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 ILVBLA1L0T0 632 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 CCDC78A2IDD5 438 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 LYPLA1O75608 230 aaPredicted RBP23.3■■□□□ 1.32
VPS16-201ENST00000380443 HSPA4LO95757 839 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 ATXN1LP0C7T5 689 aaKnown RBP23.3■■□□□ 1.32
VPS16-201ENST00000380443 ETFBP38117 255 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 ABCG1P45844 678 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 ACVR1Q04771 509 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 VEPH1Q14D04 833 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 SIRPB2Q5JXA9 342 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 DEFB128Q7Z7B8 93 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 SETD3Q86TU7 594 aaPredicted RBP23.3■■□□□ 1.32
VPS16-201ENST00000380443 ACVR1CQ8NER5 493 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 SEMA3CQ99985 751 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 PPP1R12CQ9BZL4 782 aa23.3■■□□□ 1.32
VPS16-201ENST00000380443 CORO1CQ9ULV4 474 aaPredicted RBP23.3■■□□□ 1.32
VPS16-201ENST00000380443 C2orf71A6NGG8 1288 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 KDELR3O43731 214 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 LATS1O95835 1130 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 SERPINF2P08697 491 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 AOC1P19801 751 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 TLE2Q04725 743 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.29■■□□□ 1.32
VPS16-201ENST00000380443 KDELC2Q7Z4H8 507 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 CIR1Q86X95 450 aaPredicted RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 TMPRSS6Q8IU80 811 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 TMEM151AQ8N4L1 468 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 PDCD6IPQ8WUM4 868 aaKnown RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 ELMO2Q96JJ3 720 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 ZNF558Q96NG5 402 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 MRPL57Q9BQC6 102 aaKnown RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 VN1R3Q9BXE9 311 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 ATP11BQ9Y2G3 1177 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 MRPL42Q9Y6G3 142 aaKnown RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 SLCO1B7G3V0H7 640 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 TNRC18O15417 2968 aaPredicted RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 GSC2O15499 205 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 COCHO43405 550 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 UPP2O95045 317 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 SLC6A4P31645 630 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 SERPINB5P36952 375 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 SLC26A3P40879 764 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 TAF12Q16514 161 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 METTL21CQ5VZV1 264 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 ICE2Q659A1 982 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 LRRC8EQ6NSJ5 796 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 TTC7BQ86TV6 843 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 GPR65Q8IYL9 337 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 FAM13CQ8NE31 585 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 SCG3Q8WXD2 468 aaKnown RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 SCYL1Q96KG9 808 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 PSKH2Q96QS6 385 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 MGME1Q9BQP7 344 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 DRC3Q9H069 523 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 ILKAPQ9H0C8 392 aaPredicted RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 CDH19Q9H159 772 aa23.29■■□□□ 1.32
VPS16-201ENST00000380443 ARIH1Q9Y4X5 557 aaPredicted RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 ZFP37Q9Y6Q3 630 aaPredicted RBP23.29■■□□□ 1.32
VPS16-201ENST00000380443 CHD5Q8TDI0 1954 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 ABHD14A-ACY1A0A1B0GW23 586 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 TARM1B6A8C7 271 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 PHGDHO43175 533 aaKnown RBP23.28■■□□□ 1.32
VPS16-201ENST00000380443 LMNAP02545 664 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms