RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 POLR1EQ9GZS1 481 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 MAGEH1Q9H213 219 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 CRISPLD1Q9H336 500 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 HIPK3Q9H422 1215 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 CCSER2Q9H7U1 834 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 STK38LQ9Y2H1 464 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 CHD5Q8TDI0 1954 aa10.58□□□□□ -0.72
POLR2J3-201ENST00000379340 FAM95CA0A1B0GW59 222 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 NT5C1B-RDH14C9J2C7 533 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 G3V2L1 256 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 J3KR12 359 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC7A4O43246 635 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 KLHL2O95198 593 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 TBX18O95935 607 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 EPOP01588 193 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 AHSGP02765 367 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 FGF1P05230 155 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 MMP2P08253 660 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 HMBSP08397 361 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CSF2RAP15509 400 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 STMN1P16949 149 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 HLA-DPA1P20036 260 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 RFC2P35250 354 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CD86P42081 329 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC1A2P43004 574 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 PPP3CCP48454 512 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CLCN5P51795 746 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CDH4P55283 916 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 RAB10P61026 200 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 SEPT6Q14141 434 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF235Q14590 738 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 RFTN1Q14699 578 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 SWT1Q5T5J6 900 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ALG1LQ6GMV1 187 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 NADSYN1Q6IA69 706 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CNKSR3Q6P9H4 555 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 PRSS55Q6UWB4 352 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ZYG11AQ6WRX3 759 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 LONP2Q86WA8 852 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 PLD6Q8N2A8 252 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ARRDC2Q8TBH0 407 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 GIPC2Q8TF65 315 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 BCL7CQ8WUZ0 217 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 PSMG2Q969U7 264 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 UTP4Q969X6 686 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 TSPAN17Q96FV3 270 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 IGSF21Q96ID5 467 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 FEM1CQ96JP0 617 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ZNF778Q96MU6 729 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 SORT1Q99523 831 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 DDX50Q9BQ39 737 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 C20orf27Q9GZN8 174 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 NMUR2Q9GZQ4 415 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 NKX2-4Q9H2Z4 354 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 TASP1Q9H6P5 420 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CAB39LQ9H9S4 337 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 FBXO6Q9NRD1 293 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ARL8BQ9NVJ2 186 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 OXSMQ9NWU1 459 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 CXXC1Q9P0U4 656 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 FBXO5Q9UKT4 447 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 YBX2Q9Y2T7 364 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 ACOT9Q9Y305 439 aa10.57□□□□□ -0.72
POLR2J3-201ENST00000379340 LOC285095A0A1B0GVY8 99 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 CAPN14A8MX76 684 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 ITM2AO43736 263 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 TIMP1P01033 207 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 KITP10721 976 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 HOXB8P17481 243 aaPredicted RBP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 CES1P23141 567 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 ARNTP27540 789 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 LEPRP48357 1165 aaKnown RBP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 SLC12A2P55011 1212 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 DSC2Q02487 901 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 ITGA9Q13797 1035 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 IKBKEQ14164 716 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 SMAD1Q15797 465 aaKnown RBP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 CNGA3Q16281 694 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 PCSK7Q16549 785 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 HECTD3Q5T447 861 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 LIPMQ5VYY2 423 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 ICE2Q659A1 982 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 NEPROQ6NW34 567 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 CHST9Q7L1S5 443 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 TAS1R1Q7RTX1 841 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 ALYREFQ86V81 257 aaKnown RBP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 TMEM173Q86WV6 379 aaPredicted RBP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 LGI2Q8N0V4 545 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 TET1Q8NFU7 2136 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 STYXQ8WUJ0 223 aa10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 TRMT2BQ96GJ1 504 aaKnown RBP10.56□□□□□ -0.72
POLR2J3-201ENST00000379340 SCLYQ96I15 445 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms