RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FNDC3BQ53EP0 1204 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ADGRD1Q6QNK2 874 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 PHACTR1Q9C0D0 580 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 MID1IP1Q9NPA3 183 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 PCDHGC4Q9Y5F7 938 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 DOCK2Q92608 1830 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ENTPD5O75356 428 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 KRT16P08779 473 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 LTA4HP09960 611 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 TEDDM1Q5T9Z0 273 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 OR52K2Q8NGK3 314 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 CXorf38Q8TB03 319 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 C2orf15Q8WU43 125 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 SPATA16Q9BXB7 569 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 POMKQ9H5K3 350 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 TLR6Q9Y2C9 796 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 STARD13Q9Y3M8 1113 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ARAP2Q8WZ64 1704 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 MYH15Q9Y2K3 1946 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 SRRM3A6NNA2 597 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 GAD2Q05329 585 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 SEMA5AQ13591 1074 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CYTH1Q15438 398 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 PFKFB4Q16877 469 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 AGKQ53H12 422 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 FBXL19Q6PCT2 694 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CYP4X1Q8N118 509 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 KREMEN2Q8NCW0 462 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 SUSD6Q92537 303 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TLE6Q9H808 572 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CERS4Q9HA82 394 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 XPR1Q9UBH6 696 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 GALTP07902 379 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 MSH3P20585 1137 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 MZF1P28698 734 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CHRNA4P43681 627 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CXCR3P49682 368 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 KLF1Q13351 362 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 ACOX1Q15067 660 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TMEM259Q4ZIN3 620 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 ESRP1Q6NXG1 681 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 FBXL22Q6P050 247 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TLCD1Q96CP7 247 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CATSPER2Q96P56 530 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 GPR62Q9BZJ7 368 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 OSBPL2Q9H1P3 480 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 MAGEH1Q9H213 219 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 IGSF9Q9P2J2 1179 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TAGLN3Q9UI15 199 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 VWA7Q9Y334 891 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 SQORQ9Y6N5 450 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TMEM247A6NEH6 219 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 NEDD8-MDP1E9PL57 170 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 UBDO15205 165 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 CCNT2O60583 730 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 KATNA1O75449 491 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 NDST3O95803 873 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 AFF1P51825 1210 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 PRKAA2P54646 552 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 HSPA14Q0VDF9 509 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 STK40Q8N2I9 435 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 OR4K2Q8NGD2 314 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TBATAQ96M53 351 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 ACOX2Q99424 681 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 TCF25Q9BQ70 676 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 GID8Q9NWU2 228 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
SHROOM1-203ENST00000378679 ABHD14A-ACY1A0A1B0GW23 586 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 IL10P22301 178 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 PTPN4P29074 926 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 KCNQ1P51787 676 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 OR10T2Q8NGX3 314 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 OR4L1Q8NH43 312 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 TMEM159Q96B96 161 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 MYLK2Q9H1R3 596 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 C11orf49Q9H6J7 331 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 MCM8Q9UJA3 840 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 MFHAS1Q9Y4C4 1052 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 YIPF1Q9Y548 306 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 TBC1D4O60343 1298 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 TTPAP49638 278 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 NDST2P52849 883 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 NR6A1Q15406 480 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 PPM1JQ5JR12 505 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 STXBP5Q5T5C0 1151 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SLC9A4Q6AI14 798 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 CES5AQ6NT32 575 aa14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 LDB1Q86U70 411 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-203ENST00000378679 SMG7Q92540 1137 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms